Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695171

Identifier: 209695171

GI number: 209695171

Start: 1769971

End: 1770141

Strand: Direct

Name: 209695171

Synonym: VSAL_I1675

Alternate gene names: NA

Gene position: 1769971-1770141 (Clockwise)

Preceding gene: 209695170

Following gene: 209695173

Centisome position: 53.23

GC content: 38.01

Gene sequence:

>171_bases
ATGTTTAACTTAGAAGGTCACTGTGACTGGTGTAAAAAGCCAGCAATGGTTTTACAGCATCAATATTGTGACGGTGCGAA
ATACTACGCGTGTGTGGACTGCAATGATTACGCTAAAATCGATATTCGAGAATACGATTTAGCTGAAATGGAACAGATGA
ATCAAAAGTAA

Upstream 100 bases:

>100_bases
AACAATAAGTTCTCTATATAATGCACCACACTTTCACATGTTAAATAAATGTAAAATATAATTCATGTGAAATTCAAAGA
ATAAAAAAAGAGAAGGTATT

Downstream 100 bases:

>100_bases
CGTGCAGAAAATAAGCAGTAGATATAAAAATGCCGATGATAAACATCGGCATTTTTGTTTTTACATATTACATCTAAAAA
GTACGTTCTAAATTATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MFNLEGHCDWCKKPAMVLQHQYCDGAKYYACVDCNDYAKIDIREYDLAEMEQMNQK

Sequences:

>Translated_56_residues
MFNLEGHCDWCKKPAMVLQHQYCDGAKYYACVDCNDYAKIDIREYDLAEMEQMNQK
>Mature_56_residues
MFNLEGHCDWCKKPAMVLQHQYCDGAKYYACVDCNDYAKIDIREYDLAEMEQMNQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6672; Mature: 6672

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.9 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
16.1 %Cys+Met (Translated Protein)
8.9 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
16.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNLEGHCDWCKKPAMVLQHQYCDGAKYYACVDCNDYAKIDIREYDLAEMEQMNQK
CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHCCC
>Mature Secondary Structure
MFNLEGHCDWCKKPAMVLQHQYCDGAKYYACVDCNDYAKIDIREYDLAEMEQMNQK
CCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA