Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695166

Identifier: 209695166

GI number: 209695166

Start: 1765750

End: 1766061

Strand: Direct

Name: 209695166

Synonym: VSAL_I1670

Alternate gene names: NA

Gene position: 1765750-1766061 (Clockwise)

Preceding gene: 209695165

Following gene: 209695167

Centisome position: 53.1

GC content: 37.82

Gene sequence:

>312_bases
ATGCAAAAAGATAAAAAGAGAACACCAGAGCAATGGCACGCTCTATTTGAATCTCAGCAATCTAGCAAGCTTAGTGCCGC
TGAATTTTGTAGTAACCATAATATTCTGCCAAAGACATTTAGTGCACGTAAAGCACGATGGAAACAAAAGATTAACGCTT
CTACTTTCTTGAAAGTAGAAGCGTTAACATCAACTATCATCGCCACTCCACAATTACCAGATATTCAACTTTCTATCGGA
AAATTGCGATTAACATTGCCAGCTACTGAACCTCACTGGATAGGACTCTTATTAAAAGGGTATCAATCATGA

Upstream 100 bases:

>100_bases
TCCCCACCACAAAAACGCCGTAAGCGTGCGGGGAACTACACCTAACAAATAAAATTCATTATGCGTATCTTACGATCTTT
CATTTAACGAGAACGTAATT

Downstream 100 bases:

>100_bases
ATGTATTTACTGATGTTTCCACCATTTATCTTCATCGTGATTTTGTCGATTTTCGCAAGGCCATTAATGGCCTTGTCGTG
ATTGTTGAGCAAGAAATGCA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MQKDKKRTPEQWHALFESQQSSKLSAAEFCSNHNILPKTFSARKARWKQKINASTFLKVEALTSTIIATPQLPDIQLSIG
KLRLTLPATEPHWIGLLLKGYQS

Sequences:

>Translated_103_residues
MQKDKKRTPEQWHALFESQQSSKLSAAEFCSNHNILPKTFSARKARWKQKINASTFLKVEALTSTIIATPQLPDIQLSIG
KLRLTLPATEPHWIGLLLKGYQS
>Mature_103_residues
MQKDKKRTPEQWHALFESQQSSKLSAAEFCSNHNILPKTFSARKARWKQKINASTFLKVEALTSTIIATPQLPDIQLSIG
KLRLTLPATEPHWIGLLLKGYQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11688; Mature: 11688

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDKKRTPEQWHALFESQQSSKLSAAEFCSNHNILPKTFSARKARWKQKINASTFLKVE
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEHH
ALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS
HHHHHHCCCCCCCCEEEEECEEEEEECCCCCHHHHHEEECCCC
>Mature Secondary Structure
MQKDKKRTPEQWHALFESQQSSKLSAAEFCSNHNILPKTFSARKARWKQKINASTFLKVE
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEHH
ALTSTIIATPQLPDIQLSIGKLRLTLPATEPHWIGLLLKGYQS
HHHHHHCCCCCCCCEEEEECEEEEEECCCCCHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA