Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695126
Identifier: 209695126
GI number: 209695126
Start: 1731257
End: 1731661
Strand: Direct
Name: 209695126
Synonym: VSAL_I1625
Alternate gene names: NA
Gene position: 1731257-1731661 (Clockwise)
Preceding gene: 209695124
Following gene: 209695127
Centisome position: 52.07
GC content: 34.81
Gene sequence:
>405_bases ATGAAAGGATTAACGAGTGGGATCCACCATGTTGGTTTGTCAGTATCAAAGCTAGAAGAAAGTGCACAATTTTTTACTGA ACTATTAGGATGGCAAGAAGTAAAAAGAGATATGAATTACCCTGCAATATTTGTCAGCGATGGTTCTATTATGCTGACAC TCTGGTCAGTAAAGTCTGATAGTTCAATCAAGTTTGATAGAAAAAATAATGTTGGACTCCATCATTTAGCACTATCAGTC GAAAGTGAAGATATACTCATTACAATTTATAAACGATTATTAAATGCGGGGACATTAATTGAATTCTCACCTGAACCTCT TCAAATAGGTCCTAGTACACATATGATGTGTTATGACCCAAGTGGAATTCGAATTGAATTTATCTGGACATGTCATCAGT CATAA
Upstream 100 bases:
>100_bases CTTGCAAATATAAACTAAACGGTTTAGTTTATATTTAATGTGAATCCATTTTTAATAAATGAGATTATAATTTTACTCAT ATAAAAAATAAGGATATTTA
Downstream 100 bases:
>100_bases CAACACATGTTAATCAGTTATCCATTATTTATATTGGTTTAATAAAAGAATATGAATCAAAAAATATTATTTATTTTTTC TATTATATACACATCATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Glyoxalase Family Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKGLTSGIHHVGLSVSKLEESAQFFTELLGWQEVKRDMNYPAIFVSDGSIMLTLWSVKSDSSIKFDRKNNVGLHHLALSV ESEDILITIYKRLLNAGTLIEFSPEPLQIGPSTHMMCYDPSGIRIEFIWTCHQS
Sequences:
>Translated_134_residues MKGLTSGIHHVGLSVSKLEESAQFFTELLGWQEVKRDMNYPAIFVSDGSIMLTLWSVKSDSSIKFDRKNNVGLHHLALSV ESEDILITIYKRLLNAGTLIEFSPEPLQIGPSTHMMCYDPSGIRIEFIWTCHQS >Mature_134_residues MKGLTSGIHHVGLSVSKLEESAQFFTELLGWQEVKRDMNYPAIFVSDGSIMLTLWSVKSDSSIKFDRKNNVGLHHLALSV ESEDILITIYKRLLNAGTLIEFSPEPLQIGPSTHMMCYDPSGIRIEFIWTCHQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15112; Mature: 15112
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLTSGIHHVGLSVSKLEESAQFFTELLGWQEVKRDMNYPAIFVSDGSIMLTLWSVKSD CCCCCCCHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCEEEEEEEECCCC SSIKFDRKNNVGLHHLALSVESEDILITIYKRLLNAGTLIEFSPEPLQIGPSTHMMCYDP CCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEECCCCEEEEECC SGIRIEFIWTCHQS CCCEEEEEEEECCC >Mature Secondary Structure MKGLTSGIHHVGLSVSKLEESAQFFTELLGWQEVKRDMNYPAIFVSDGSIMLTLWSVKSD CCCCCCCHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEECCEEEEEEEECCCC SSIKFDRKNNVGLHHLALSVESEDILITIYKRLLNAGTLIEFSPEPLQIGPSTHMMCYDP CCEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEECCCCEEEEECC SGIRIEFIWTCHQS CCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA