Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
---|---|
Accession | NC_011312 |
Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is ggpS [H]
Identifier: 209695124
GI number: 209695124
Start: 1729423
End: 1730166
Strand: Direct
Name: ggpS [H]
Synonym: VSAL_I1623
Alternate gene names: 209695124
Gene position: 1729423-1730166 (Clockwise)
Preceding gene: 209695122
Following gene: 209695126
Centisome position: 52.01
GC content: 40.05
Gene sequence:
>744_bases ATGATAAAAATGCTCGTTTGCGACTTCGATGGTACGATTAATGGCGGACCATCACTGGGTGTAGACCAATTTTCAGCGTA CCTAGATACACAACCCGAACTGCACTTTATTATTGCTACGGGTAGAACGTTGCCCTCTATTAAAGAAGGGTTAACTACGC ATAACTACCCAAAACCACGGTGTATTATTAGTGATATTGGCACACGTATTAATTATGACTATGATTTAATTGCAGATGAA CGTTGGCAACACCAATTGCAAACAAGATGGAATAAATCGGCAATACAAACCGCTTTGCAAGACATCACGTTTTTAGGAAA ATGTAACCCATCGCATCAAGGCGATTATAAGATCACTTTTGAGGGACAACTTGATCACAAGCAATATTCAGCAATTGTAA CGGCACTTGCACAACAATCAATTGATGTCGATATAACCTATTCTCATGACTGGTTTCTTGATATCACCCCAAAGGGGATA AACAAAGCCAGTGCCATTCACTACATCATGCAAAAATACAATCTGACTGCAGAAGAAATTTGTGTCGCAGGAGATTCAGC CAATGATACCAGCATGTTAACCATGCCAGGTATTAACGCCATTTTAGTCGCCAATCATTATAACGAAGTTGCTCATTTGT CTGCGCTCAATAACGTGTATACAAGCAATGCCTCCCATGCAGAAGGCGTATTAGAAGGGTTAATATACTGGCAAAATATT GCGGTAGAAGAAATGACGGAATAG
Upstream 100 bases:
>100_bases ACACACGGATAATTTCAGATAACACTAAACACGACTATTGACCAATACACACGTTTAAAAGCAGTACGTTTCTCTCGACA CCAACAAATAGGTAATCACC
Downstream 100 bases:
>100_bases CATTCATCAATATCAATTTTTAACGTAGGGAAATAATAACACCAATCATTACCTAAAGAAGAAGCCACTTGATGTTACTT AGATAGGGTTGTCGTTAATA
Product: sucrose-6F-phosphate phosphohydrolase
Products: NA
Alternate protein names: Glucosyl-glycerol-phosphate synthase; GG-phosphate synthase; GGPS [H]
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MIKMLVCDFDGTINGGPSLGVDQFSAYLDTQPELHFIIATGRTLPSIKEGLTTHNYPKPRCIISDIGTRINYDYDLIADE RWQHQLQTRWNKSAIQTALQDITFLGKCNPSHQGDYKITFEGQLDHKQYSAIVTALAQQSIDVDITYSHDWFLDITPKGI NKASAIHYIMQKYNLTAEEICVAGDSANDTSMLTMPGINAILVANHYNEVAHLSALNNVYTSNASHAEGVLEGLIYWQNI AVEEMTE
Sequences:
>Translated_247_residues MIKMLVCDFDGTINGGPSLGVDQFSAYLDTQPELHFIIATGRTLPSIKEGLTTHNYPKPRCIISDIGTRINYDYDLIADE RWQHQLQTRWNKSAIQTALQDITFLGKCNPSHQGDYKITFEGQLDHKQYSAIVTALAQQSIDVDITYSHDWFLDITPKGI NKASAIHYIMQKYNLTAEEICVAGDSANDTSMLTMPGINAILVANHYNEVAHLSALNNVYTSNASHAEGVLEGLIYWQNI AVEEMTE >Mature_247_residues MIKMLVCDFDGTINGGPSLGVDQFSAYLDTQPELHFIIATGRTLPSIKEGLTTHNYPKPRCIISDIGTRINYDYDLIADE RWQHQLQTRWNKSAIQTALQDITFLGKCNPSHQGDYKITFEGQLDHKQYSAIVTALAQQSIDVDITYSHDWFLDITPKGI NKASAIHYIMQKYNLTAEEICVAGDSANDTSMLTMPGINAILVANHYNEVAHLSALNNVYTSNASHAEGVLEGLIYWQNI AVEEMTE
Specific function: Involved in salt tolerance by producing GG-phosphate from ADP-glucose and glycerol-3-phosphate (G3P), an intermediate in the synthesis of the osmolyte glucosylglycerol (GG) [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012764 - InterPro: IPR001830 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR006380 [H]
Pfam domain/function: PF00982 Glyco_transf_20; PF05116 S6PP [H]
EC number: =2.4.1.213 [H]
Molecular weight: Translated: 27614; Mature: 27614
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMLVCDFDGTINGGPSLGVDQFSAYLDTQPELHFIIATGRTLPSIKEGLTTHNYPKPR CEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCE CIISDIGTRINYDYDLIADERWQHQLQTRWNKSAIQTALQDITFLGKCNPSHQGDYKITF EEHHHCCCEECCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCCCCEEEEE EGQLDHKQYSAIVTALAQQSIDVDITYSHDWFLDITPKGINKASAIHYIMQKYNLTAEEI ECCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHE CVAGDSANDTSMLTMPGINAILVANHYNEVAHLSALNNVYTSNASHAEGVLEGLIYWQNI EEECCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC AVEEMTE CHHHHCC >Mature Secondary Structure MIKMLVCDFDGTINGGPSLGVDQFSAYLDTQPELHFIIATGRTLPSIKEGLTTHNYPKPR CEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCE CIISDIGTRINYDYDLIADERWQHQLQTRWNKSAIQTALQDITFLGKCNPSHQGDYKITF EEHHHCCCEECCCEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCCCCEEEEE EGQLDHKQYSAIVTALAQQSIDVDITYSHDWFLDITPKGINKASAIHYIMQKYNLTAEEI ECCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHE CVAGDSANDTSMLTMPGINAILVANHYNEVAHLSALNNVYTSNASHAEGVLEGLIYWQNI EEECCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC AVEEMTE CHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA