Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695051
Identifier: 209695051
GI number: 209695051
Start: 1653013
End: 1653237
Strand: Direct
Name: 209695051
Synonym: VSAL_I1547
Alternate gene names: NA
Gene position: 1653013-1653237 (Clockwise)
Preceding gene: 209695050
Following gene: 209695052
Centisome position: 49.71
GC content: 38.22
Gene sequence:
>225_bases ATGAATACGTTTTATTATTTTAGAGTTAGCGTTAGCTACCAAGCCTTTTTAAGTCATTACTCTGGCACGGCGAGTACGGT TTTAGTCATGACTGAACAAGGTTTAAAGTTACAGTTACCAGCGTCGCGTTTTCGCGCATTTTTAACTCAATTAGGAGTGA AAGGGCGCTTTCGTTTAACTGTGGACCAAAATAATCGGTTTGTAAATCTTGAACAAGTAGGATAA
Upstream 100 bases:
>100_bases TCAATAAAAGTGATAAATGGTCAGTATTTTATGCTGACCATTTTTTGTTTTTTCTTTATACTTTGTTTTTGATAGTTCAA AGTAGATAACATCGTCGATC
Downstream 100 bases:
>100_bases ACCTCTACCTTAATCACACTTCTAACTATAAACCCTCTAGCACGTAAAAAAGTCATAACGTTTCCGTCATATTATCCTTA CAATATGAGGCGCATAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MNTFYYFRVSVSYQAFLSHYSGTASTVLVMTEQGLKLQLPASRFRAFLTQLGVKGRFRLTVDQNNRFVNLEQVG
Sequences:
>Translated_74_residues MNTFYYFRVSVSYQAFLSHYSGTASTVLVMTEQGLKLQLPASRFRAFLTQLGVKGRFRLTVDQNNRFVNLEQVG >Mature_74_residues MNTFYYFRVSVSYQAFLSHYSGTASTVLVMTEQGLKLQLPASRFRAFLTQLGVKGRFRLTVDQNNRFVNLEQVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8500; Mature: 8500
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFYYFRVSVSYQAFLSHYSGTASTVLVMTEQGLKLQLPASRFRAFLTQLGVKGRFRLT CCEEEEEEEEEEHHHHHHHCCCCCEEEEEEECCCCEEEECHHHHHHHHHHCCCCCEEEEE VDQNNRFVNLEQVG EECCCCEEEEEECC >Mature Secondary Structure MNTFYYFRVSVSYQAFLSHYSGTASTVLVMTEQGLKLQLPASRFRAFLTQLGVKGRFRLT CCEEEEEEEEEEHHHHHHHCCCCCEEEEEEECCCCEEEECHHHHHHHHHHCCCCCEEEEE VDQNNRFVNLEQVG EECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA