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The map label for this gene is proQ

Identifier: 209695048

GI number: 209695048

Start: 1646621

End: 1647253

Strand: Direct

Name: proQ

Synonym: VSAL_I1543

Alternate gene names: 209695048

Gene position: 1646621-1647253 (Clockwise)

Preceding gene: 209695047

Following gene: 209695049

Centisome position: 49.52

GC content: 43.13

Gene sequence:

>633_bases
ATGGAAAACTCTGAAAAACTAGCGAACAGCAAAGAAGTTATTGCATACATTGCTGAGCGTTTCCCGAAATGCTTTATTTT
AGAAGGCGAAGCTAAACCTCTTAAAATTGGTATCTTCCAAGATCTAGCGGAGCGTTTAAGCGATGATTCTAAAGTAAGTA
AAACTCAGCTACGTGCTGGCTTACGTCAGTACACATCTTCTTGGCGTTACCTACACGGTGTTAAGCCGGGCGCATCTCGT
GTTGATTTAGATGGTAACCCTTGTGGTGAACTAGAAGAAGAGCACGTTGAACACGCTAAAGCATCTCTTGAAGAGAGCAA
AGCTAAAGTAGCTGCTCGTCGTAAAGAGCAAGCGAAAAAAGCAAGAGAAGAAGCGAAAGCTAAAAAACCAGCTCGTGCTA
CTACTCCACCAAAGCGTCGTCCTCAACCTGCTGCTGTTGCGAAAAAGCAAGAGAAGCCAGTTGAAACTCGTGCTCTAAAC
TCTGACGAAATTACCGTAGGTAATAACGTAAGTGTGAACATGGGTAAAGGCAACATGCCAGCGACAATCGTAGAAATTAA
CAAGGATGATGTTCGAATTCGCTTATCAAACGGCCTACAAATGGTTGTTAAAGCGGAGAACCTTCGTTCATAA

Upstream 100 bases:

>100_bases
ACTAGCGAACAGCAAAGAAGTTATTGCATATATAATAGCGCAATATCTTTACTAGAAATAAACCTATATACGGACTAAAC
CGTATCTATCAGGAAACTAC

Downstream 100 bases:

>100_bases
AGGAGTACTCCCGACGCATGAATTGTCGATTTAGAGTCTCGCTGATTGCTGCTGGCGTAATGCTAGCAGCGTCTGCACAC
GCACTTGAAGCTAAGGTTCT

Product: solute/DNA competence effector

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MENSEKLANSKEVIAYIAERFPKCFILEGEAKPLKIGIFQDLAERLSDDSKVSKTQLRAGLRQYTSSWRYLHGVKPGASR
VDLDGNPCGELEEEHVEHAKASLEESKAKVAARRKEQAKKAREEAKAKKPARATTPPKRRPQPAAVAKKQEKPVETRALN
SDEITVGNNVSVNMGKGNMPATIVEINKDDVRIRLSNGLQMVVKAENLRS

Sequences:

>Translated_210_residues
MENSEKLANSKEVIAYIAERFPKCFILEGEAKPLKIGIFQDLAERLSDDSKVSKTQLRAGLRQYTSSWRYLHGVKPGASR
VDLDGNPCGELEEEHVEHAKASLEESKAKVAARRKEQAKKAREEAKAKKPARATTPPKRRPQPAAVAKKQEKPVETRALN
SDEITVGNNVSVNMGKGNMPATIVEINKDDVRIRLSNGLQMVVKAENLRS
>Mature_210_residues
MENSEKLANSKEVIAYIAERFPKCFILEGEAKPLKIGIFQDLAERLSDDSKVSKTQLRAGLRQYTSSWRYLHGVKPGASR
VDLDGNPCGELEEEHVEHAKASLEESKAKVAARRKEQAKKAREEAKAKKPARATTPPKRRPQPAAVAKKQEKPVETRALN
SDEITVGNNVSVNMGKGNMPATIVEINKDDVRIRLSNGLQMVVKAENLRS

Specific function: Not Exactly Known; May Be A Structural Element That Influences The Osmotic Activation Of Prop At A Posttranslational Level. [C]

COG id: COG3109

COG function: function code T; Activator of osmoprotectant transporter ProP

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proQ family

Homologues:

Organism=Escherichia coli, GI48994892, Length=233, Percent_Identity=51.931330472103, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PROQ_ALISL (B6ELC5)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262977.1
- ProteinModelPortal:   B6ELC5
- GeneID:   6987188
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I1543
- HOGENOM:   HBG495470
- OMA:   RFPQCFS
- ProtClustDB:   PRK04950
- GO:   GO:0005737
- HAMAP:   MF_00749
- InterPro:   IPR016103
- Gene3D:   G3DSA:1.10.1710.10
- SMART:   SM00945

Pfam domain/function: PF04352 ProQ; SSF48657 FINO

EC number: NA

Molecular weight: Translated: 23298; Mature: 23298

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSEKLANSKEVIAYIAERFPKCFILEGEAKPLKIGIFQDLAERLSDDSKVSKTQLRAG
CCCHHHHHCHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHH
LRQYTSSWRYLHGVKPGASRVDLDGNPCGELEEEHVEHAKASLEESKAKVAARRKEQAKK
HHHHHHCCCEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREEAKAKKPARATTPPKRRPQPAAVAKKQEKPVETRALNSDEITVGNNVSVNMGKGNMP
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCEEECCCEEEEECCCCCC
ATIVEINKDDVRIRLSNGLQMVVKAENLRS
EEEEEECCCCEEEEECCCEEEEEECCCCCC
>Mature Secondary Structure
MENSEKLANSKEVIAYIAERFPKCFILEGEAKPLKIGIFQDLAERLSDDSKVSKTQLRAG
CCCHHHHHCHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHH
LRQYTSSWRYLHGVKPGASRVDLDGNPCGELEEEHVEHAKASLEESKAKVAARRKEQAKK
HHHHHHCCCEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREEAKAKKPARATTPPKRRPQPAAVAKKQEKPVETRALNSDEITVGNNVSVNMGKGNMP
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCEEECCCEEEEECCCCCC
ATIVEINKDDVRIRLSNGLQMVVKAENLRS
EEEEEECCCCEEEEECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA