Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695036
Identifier: 209695036
GI number: 209695036
Start: 1632037
End: 1632198
Strand: Direct
Name: 209695036
Synonym: VSAL_I1531
Alternate gene names: NA
Gene position: 1632037-1632198 (Clockwise)
Preceding gene: 209695035
Following gene: 209695037
Centisome position: 49.08
GC content: 37.04
Gene sequence:
>162_bases ATGGAGAGTTACATGACAAGTAAAACAAAAGCAACGCGCGAAGTTAAAACAGGGAAGAAAACGAAGCAAGCCAATACGGA TACTGCGGCTAAGCAAGATCCTCGTATAAAGATCGAAGACATTTTAGCACAAAGAGAATTTGATAAAATGTTTGAGTTAT AA
Upstream 100 bases:
>100_bases GGATCAAGATCATTATTATTATCTAATTAAGCATTTTTAGTATAAAATTGACGCTGCCATGATACATTGTTGCTCTTAAA CTGTTAAGATGCACTCTTAA
Downstream 100 bases:
>100_bases GCTTGCTTTATATAGCTAAGTGCAAAAGAGAAGAACGTATAGCTATAAACGCTTACGTTCTTTTTTTTGGTTACAACTTT AATGATAAATAAGAGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL
Sequences:
>Translated_53_residues MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL >Mature_53_residues MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6152; Mature: 6152
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA