Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is 209695036

Identifier: 209695036

GI number: 209695036

Start: 1632037

End: 1632198

Strand: Direct

Name: 209695036

Synonym: VSAL_I1531

Alternate gene names: NA

Gene position: 1632037-1632198 (Clockwise)

Preceding gene: 209695035

Following gene: 209695037

Centisome position: 49.08

GC content: 37.04

Gene sequence:

>162_bases
ATGGAGAGTTACATGACAAGTAAAACAAAAGCAACGCGCGAAGTTAAAACAGGGAAGAAAACGAAGCAAGCCAATACGGA
TACTGCGGCTAAGCAAGATCCTCGTATAAAGATCGAAGACATTTTAGCACAAAGAGAATTTGATAAAATGTTTGAGTTAT
AA

Upstream 100 bases:

>100_bases
GGATCAAGATCATTATTATTATCTAATTAAGCATTTTTAGTATAAAATTGACGCTGCCATGATACATTGTTGCTCTTAAA
CTGTTAAGATGCACTCTTAA

Downstream 100 bases:

>100_bases
GCTTGCTTTATATAGCTAAGTGCAAAAGAGAAGAACGTATAGCTATAAACGCTTACGTTCTTTTTTTTGGTTACAACTTT
AATGATAAATAAGAGCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL

Sequences:

>Translated_53_residues
MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL
>Mature_53_residues
MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6152; Mature: 6152

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESYMTSKTKATREVKTGKKTKQANTDTAAKQDPRIKIEDILAQREFDKMFEL
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA