Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is grxC [C]
Identifier: 209695034
GI number: 209695034
Start: 1630666
End: 1631229
Strand: Direct
Name: grxC [C]
Synonym: VSAL_I1529
Alternate gene names: 209695034
Gene position: 1630666-1631229 (Clockwise)
Preceding gene: 209695033
Following gene: 209695035
Centisome position: 49.04
GC content: 39.89
Gene sequence:
>564_bases ATGAAGCCAATAAAAATTACATTATATCGCTGGGCAGGAAGTTGGGGACCTTTCAAGGTTAACGTTCCTTGTGGTGAATG CACATTAACTAAAGATATTCTTCAAGATACTTTTGATACCGAGCTTGCCGGTATTCCGATTGAATTAGAAGTTAAAGATT GGTTATCACATTGGTGGGAACCATTAAAGCTTAAAGCATGGCATGCACCGATCATTATTGTTGAAGATAAGGTCATTAGC CAAGGTGAGGCATTGAATCGTGGAGTGCTTGTTCAAGCCGTGATAGCGAAAGTCGCTCAACGTGATGAGATAAAAGGTAA TGTTGTTTTTGGTAAAGCAACCTGTCCTTTTTGTATCAAGGCAAAAGCCGCTTTAGATGAAGCGGGTATTGAATACACTT ATCATGACGTGGTTAAAGACAGCGCAGCTCTTTATCGAATGATCCCTGAAGTGAAAGCGATCATTGGAGAGAAAACCCCC GTTACTGTGCCACAAATTTGGTTGGACGGTAAATACATTGGTGGATTTGATAATCTTGAAAAATCGATGACAATGACTGA TTAA
Upstream 100 bases:
>100_bases AATTTAAAATAGTTGACTTAATCGAAATTTAGACTAAACTAAACGGTTCAGTTTAATTCAAAGCGTTTGAGAATGACAAA CGCTGATAGGGGTAGTATCG
Downstream 100 bases:
>100_bases AGAGAGGTACTCATTATGAATAAAAAAAGACTCTTATTACTTGTTCTTCTTGCCTCTTTCGCCTTTGTTTATTTTAAATT TGGTGATCTTTTAACATTAG
Product: glutaredoxin
Products: NA
Alternate protein names: Glutaredoxin Family Protein; Glutaredoxin-Related Protein
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKPIKITLYRWAGSWGPFKVNVPCGECTLTKDILQDTFDTELAGIPIELEVKDWLSHWWEPLKLKAWHAPIIIVEDKVIS QGEALNRGVLVQAVIAKVAQRDEIKGNVVFGKATCPFCIKAKAALDEAGIEYTYHDVVKDSAALYRMIPEVKAIIGEKTP VTVPQIWLDGKYIGGFDNLEKSMTMTD
Sequences:
>Translated_187_residues MKPIKITLYRWAGSWGPFKVNVPCGECTLTKDILQDTFDTELAGIPIELEVKDWLSHWWEPLKLKAWHAPIIIVEDKVIS QGEALNRGVLVQAVIAKVAQRDEIKGNVVFGKATCPFCIKAKAALDEAGIEYTYHDVVKDSAALYRMIPEVKAIIGEKTP VTVPQIWLDGKYIGGFDNLEKSMTMTD >Mature_187_residues MKPIKITLYRWAGSWGPFKVNVPCGECTLTKDILQDTFDTELAGIPIELEVKDWLSHWWEPLKLKAWHAPIIIVEDKVIS QGEALNRGVLVQAVIAKVAQRDEIKGNVVFGKATCPFCIKAKAALDEAGIEYTYHDVVKDSAALYRMIPEVKAIIGEKTP VTVPQIWLDGKYIGGFDNLEKSMTMTD
Specific function: The Disulfide Bond Functions As An Electron Carrier In The Glutathione-Dependent Synthesis Of Deoxyribonucleotides By The Enzyme Ribonucleotide Reductase. In Addition, It Is Also Involved In Reducing Some Disulfides In A Coupled System With Glutathione R
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20916; Mature: 20916
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIKITLYRWAGSWGPFKVNVPCGECTLTKDILQDTFDTELAGIPIELEVKDWLSHWWE CCCEEEEEEEECCCCCCEEEECCCCCCEECHHHHHHHHCCHHCCCCEEEEHHHHHHHCCC PLKLKAWHAPIIIVEDKVISQGEALNRGVLVQAVIAKVAQRDEIKGNVVFGKATCPFCIK CEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEE AKAALDEAGIEYTYHDVVKDSAALYRMIPEVKAIIGEKTPVTVPQIWLDGKYIGGFDNLE HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEECCHHHHH KSMTMTD CCCCCCC >Mature Secondary Structure MKPIKITLYRWAGSWGPFKVNVPCGECTLTKDILQDTFDTELAGIPIELEVKDWLSHWWE CCCEEEEEEEECCCCCCEEEECCCCCCEECHHHHHHHHCCHHCCCCEEEEHHHHHHHCCC PLKLKAWHAPIIIVEDKVISQGEALNRGVLVQAVIAKVAQRDEIKGNVVFGKATCPFCIK CEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEE AKAALDEAGIEYTYHDVVKDSAALYRMIPEVKAIIGEKTPVTVPQIWLDGKYIGGFDNLE HHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEECCHHHHH KSMTMTD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA