Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695027

Identifier: 209695027

GI number: 209695027

Start: 1621031

End: 1621381

Strand: Direct

Name: 209695027

Synonym: VSAL_I1519

Alternate gene names: NA

Gene position: 1621031-1621381 (Clockwise)

Preceding gene: 209695026

Following gene: 209695028

Centisome position: 48.75

GC content: 38.18

Gene sequence:

>351_bases
ATGTCTTTTGAAGAGAAGTTAATAGCGGCACATAGTGAACTTGAGCTGAAAGGGGTTTGGTCCTCAAACTTTAATCCTCC
GATTGTCAGATTACTCCGAAAAGCGGGCTTACGAGTTCGACCTCCTTATTATCAAGATTTTTTTACTAATTTACTGTTTA
CCTCGCTTTTATTTAGTCTTGGTTACGGGCTGATTAGTTGGTTTTTAACGGGGCAGTATGTAAATAAAACCAACCAACAG
TCAGTCATTGAAGCCATCGCAGGCGGATTGATTTTTGGCGTTATAATATCCGTATTTTATCTTATCCGTCGTAAGCAATT
AAAGCTAACGGATTGGAATACATTGAGTTAA

Upstream 100 bases:

>100_bases
TAAGTGGATAGAAAAGAAATATCAAGAGCATGAAGACTCAAAAAAGTGAAGGTGGTGTTATCTTCATCGTTATGGATAGT
ATTGTTTAGGGAAACGACGA

Downstream 100 bases:

>100_bases
TGCTATTACGTCGCAAGTTTGATGACATTGTTGTGTTTATAAAAGGAATTTATAATGATTCACACGATTAAAGAAACGGT
ATTTACCTATCCTCAACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSFEEKLIAAHSELELKGVWSSNFNPPIVRLLRKAGLRVRPPYYQDFFTNLLFTSLLFSLGYGLISWFLTGQYVNKTNQQ
SVIEAIAGGLIFGVIISVFYLIRRKQLKLTDWNTLS

Sequences:

>Translated_116_residues
MSFEEKLIAAHSELELKGVWSSNFNPPIVRLLRKAGLRVRPPYYQDFFTNLLFTSLLFSLGYGLISWFLTGQYVNKTNQQ
SVIEAIAGGLIFGVIISVFYLIRRKQLKLTDWNTLS
>Mature_115_residues
SFEEKLIAAHSELELKGVWSSNFNPPIVRLLRKAGLRVRPPYYQDFFTNLLFTSLLFSLGYGLISWFLTGQYVNKTNQQS
VIEAIAGGLIFGVIISVFYLIRRKQLKLTDWNTLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13320; Mature: 13189

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEEKLIAAHSELELKGVWSSNFNPPIVRLLRKAGLRVRPPYYQDFFTNLLFTSLLFSL
CCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
GYGLISWFLTGQYVNKTNQQSVIEAIAGGLIFGVIISVFYLIRRKQLKLTDWNTLS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SFEEKLIAAHSELELKGVWSSNFNPPIVRLLRKAGLRVRPPYYQDFFTNLLFTSLLFSL
CHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
GYGLISWFLTGQYVNKTNQQSVIEAIAGGLIFGVIISVFYLIRRKQLKLTDWNTLS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA