Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695020

Identifier: 209695020

GI number: 209695020

Start: 1614657

End: 1614923

Strand: Direct

Name: 209695020

Synonym: VSAL_I1512

Alternate gene names: NA

Gene position: 1614657-1614923 (Clockwise)

Preceding gene: 209695019

Following gene: 209695021

Centisome position: 48.56

GC content: 35.96

Gene sequence:

>267_bases
GTGTTATTTAAGTTGATTTTTCTGTTTGCCGCATTAACGCTACATGGTGTAAAGAGATCCCCTTATCCGCCGACATTACT
CTATAGTATTCCTCTGATATTAATGGGGTTAATGTCGGGTGCGTCTTTTATTATGAGTTTGATTGGTGGCGCGATAACCC
TTTGCGTTTCATTTGTGTATTTTTCATTACTTACTCATTTTTCAAGTGGTACACAGCATTACACGATTATTATACTTGGT
GGTGGTTTATTGATTTTCTTTGTTTAA

Upstream 100 bases:

>100_bases
TATGCATATTTGGGTTTCTGAAAAATTGAGTTGGGTCCAAATTCCTAAGGGAATGGTGACGTTTGATAAACAACGTTAAT
GATAAAGATTAGGAGCTCAT

Downstream 100 bases:

>100_bases
GCACGAGCACAACGATAAATTAAGAATGGTATTGGATTTTACAAGGATGAAAGAGTGACGGTAACGGAAGAGATAGAGAA
TACATTACTGACCTTTATTA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLFKLIFLFAALTLHGVKRSPYPPTLLYSIPLILMGLMSGASFIMSLIGGAITLCVSFVYFSLLTHFSSGTQHYTIIILG
GGLLIFFV

Sequences:

>Translated_88_residues
MLFKLIFLFAALTLHGVKRSPYPPTLLYSIPLILMGLMSGASFIMSLIGGAITLCVSFVYFSLLTHFSSGTQHYTIIILG
GGLLIFFV
>Mature_88_residues
MLFKLIFLFAALTLHGVKRSPYPPTLLYSIPLILMGLMSGASFIMSLIGGAITLCVSFVYFSLLTHFSSGTQHYTIIILG
GGLLIFFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9604; Mature: 9604

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKLIFLFAALTLHGVKRSPYPPTLLYSIPLILMGLMSGASFIMSLIGGAITLCVSFVY
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLLTHFSSGTQHYTIIILGGGLLIFFV
HHHHHHHCCCCCEEEEEEECCCEEEEEC
>Mature Secondary Structure
MLFKLIFLFAALTLHGVKRSPYPPTLLYSIPLILMGLMSGASFIMSLIGGAITLCVSFVY
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSLLTHFSSGTQHYTIIILGGGLLIFFV
HHHHHHHCCCCCEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA