Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209695006
Identifier: 209695006
GI number: 209695006
Start: 1606663
End: 1606860
Strand: Direct
Name: 209695006
Synonym: VSAL_I1498
Alternate gene names: NA
Gene position: 1606663-1606860 (Clockwise)
Preceding gene: 209695005
Following gene: 209695007
Centisome position: 48.32
GC content: 40.4
Gene sequence:
>198_bases ATGGTCATCAAAAATAACATCACTCATGCAAGTGTTATTGGTTTTCCTCTTTTTTTTCTTACGACGTTTCCCGTCTCTTC TGATCCCAACGCTTCCTCATTGCCTGATGCATTTTCTCTGCCTTACTTCCAAGAATGGCCAAAAATAAAGAGTGCGATCC CGAAGCGAGATTATATTGAAGAAAGAGTCTCTCTCTAG
Upstream 100 bases:
>100_bases GAATAACTGACTCACTATTTATTTTCCCATCATCGCTTTTTTGAGCCTCTTTCTTATCCTAGACTAAAAAGAATGTATAG AATTAGAGAAGGGGTTCTCG
Downstream 100 bases:
>100_bases TATTAATACGCCATTTCTTTTATATGCGGATGAACCGTTCCAGTTTGATATTGATGAGATCCGATATGTACCTAGAGATA AAAAGGCGACGGAGGGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MVIKNNITHASVIGFPLFFLTTFPVSSDPNASSLPDAFSLPYFQEWPKIKSAIPKRDYIEERVSL
Sequences:
>Translated_65_residues MVIKNNITHASVIGFPLFFLTTFPVSSDPNASSLPDAFSLPYFQEWPKIKSAIPKRDYIEERVSL >Mature_65_residues MVIKNNITHASVIGFPLFFLTTFPVSSDPNASSLPDAFSLPYFQEWPKIKSAIPKRDYIEERVSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7373; Mature: 7373
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIKNNITHASVIGFPLFFLTTFPVSSDPNASSLPDAFSLPYFQEWPKIKSAIPKRDYIE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH ERVSL HHHCC >Mature Secondary Structure MVIKNNITHASVIGFPLFFLTTFPVSSDPNASSLPDAFSLPYFQEWPKIKSAIPKRDYIE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHH ERVSL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA