Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is yhhY [C]
Identifier: 209695003
GI number: 209695003
Start: 1604231
End: 1604734
Strand: Direct
Name: yhhY [C]
Synonym: VSAL_I1494
Alternate gene names: 209695003
Gene position: 1604231-1604734 (Clockwise)
Preceding gene: 209695002
Following gene: 209695005
Centisome position: 48.25
GC content: 39.48
Gene sequence:
>504_bases ATGGGCGTAATAGTGAGAGGCGTTAGAAAAGAAGATTCTCAAGGCATCATTAATGTATTAAACCCTATTATCGAGGGCGG TCTTTTTTCTATTTTAGATACTCCATTTTCGGTTGAGGAAGAGGCGCAGTTTATTGAAGCGTTTCCAGAGAGAGGAGTTT TTAATGTCGCTCTCGATGTTGATGGAGCATGTGTTGTAGGTTTTCAAAATGTAGAACCTTTTGCGACGTACACTCGTGCT TTTGATCATGTTGGAATTATTGGTACCTTTGTCGATGAACAATACCGAAGACAAGGCATTGCAACGGCATTGTTTGACGC TACATTTACCGTTGCGAAATCGAAAGGGTATGAGAAGTTATTTGCGTACGTTAGAGGTGATAATGAAAATGCCTTGGCTA CGTATTTAAAGCAAGGGTTTGAGATCGTTGGTACCGCAAAGAATCATGCTAAAATTCGTGGGAAATACATTGATGAAATA CTCATCGAAAAATTTCTATGGTAG
Upstream 100 bases:
>100_bases ATTTATGAATGTATTTTGTTATTATCTTTGCAGTGTGAGATATTTTTATTTAATATTTTATTGTGATTTATAGTATCAAC ATTAAATATAGGGACAAAGT
Downstream 100 bases:
>100_bases ATCGTCGTTACCATTCAATGTCTGTGCCATCAAAGCTACGAAACCTTCCTGAATCACTTGGTGTTGAGTGATGGATTAAT GTTAACAGTGATTCGGAGGT
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MGVIVRGVRKEDSQGIINVLNPIIEGGLFSILDTPFSVEEEAQFIEAFPERGVFNVALDVDGACVVGFQNVEPFATYTRA FDHVGIIGTFVDEQYRRQGIATALFDATFTVAKSKGYEKLFAYVRGDNENALATYLKQGFEIVGTAKNHAKIRGKYIDEI LIEKFLW
Sequences:
>Translated_167_residues MGVIVRGVRKEDSQGIINVLNPIIEGGLFSILDTPFSVEEEAQFIEAFPERGVFNVALDVDGACVVGFQNVEPFATYTRA FDHVGIIGTFVDEQYRRQGIATALFDATFTVAKSKGYEKLFAYVRGDNENALATYLKQGFEIVGTAKNHAKIRGKYIDEI LIEKFLW >Mature_166_residues GVIVRGVRKEDSQGIINVLNPIIEGGLFSILDTPFSVEEEAQFIEAFPERGVFNVALDVDGACVVGFQNVEPFATYTRAF DHVGIIGTFVDEQYRRQGIATALFDATFTVAKSKGYEKLFAYVRGDNENALATYLKQGFEIVGTAKNHAKIRGKYIDEIL IEKFLW
Specific function: Unknown
COG id: COG1247
COG function: function code M; Sortase and related acyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 18607; Mature: 18476
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVIVRGVRKEDSQGIINVLNPIIEGGLFSILDTPFSVEEEAQFIEAFPERGVFNVALDV CCEEECCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEC DGACVVGFQNVEPFATYTRAFDHVGIIGTFVDEQYRRQGIATALFDATFTVAKSKGYEKL CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FAYVRGDNENALATYLKQGFEIVGTAKNHAKIRGKYIDEILIEKFLW HHHHCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GVIVRGVRKEDSQGIINVLNPIIEGGLFSILDTPFSVEEEAQFIEAFPERGVFNVALDV CEEECCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEC DGACVVGFQNVEPFATYTRAFDHVGIIGTFVDEQYRRQGIATALFDATFTVAKSKGYEKL CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FAYVRGDNENALATYLKQGFEIVGTAKNHAKIRGKYIDEILIEKFLW HHHHCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA