Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694993
Identifier: 209694993
GI number: 209694993
Start: 1593892
End: 1594086
Strand: Direct
Name: 209694993
Synonym: VSAL_I1483
Alternate gene names: NA
Gene position: 1593892-1594086 (Clockwise)
Preceding gene: 209694992
Following gene: 209694995
Centisome position: 47.93
GC content: 41.03
Gene sequence:
>195_bases ATGGAGTTTTTACACGAAGAAACAATACTTTGCCCTTACTGTAATGAATCCATTGTGATTCTGGTTGATCACGAAGATCG TGAGCAAGAGTACATTGATGATTGCAGCGTTTGTTGTCGACCGATTCGAATTCAAGTGACCACTAACGACAATGACGAAT TAGTGGTCACGGTATGCGATGAGAATGAAGCGTAA
Upstream 100 bases:
>100_bases GATGATCGTTTTATATCATATCGACAAATTCATTGATTCGATTATTTTGAATTGTCCTCTAAACTTAGTAGAAGATACGA TGATGATTTAAAGAGGCGCT
Downstream 100 bases:
>100_bases GTTGATTGAATAATAATCAGTTAACGGTGATTATTTTCATTGTCTATTCTATCTGATGTTCTCTACCAAATTGAAATAAT TACTTTTCTAAATCAATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MEFLHEETILCPYCNESIVILVDHEDREQEYIDDCSVCCRPIRIQVTTNDNDELVVTVCDENEA
Sequences:
>Translated_64_residues MEFLHEETILCPYCNESIVILVDHEDREQEYIDDCSVCCRPIRIQVTTNDNDELVVTVCDENEA >Mature_64_residues MEFLHEETILCPYCNESIVILVDHEDREQEYIDDCSVCCRPIRIQVTTNDNDELVVTVCDENEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7463; Mature: 7463
Theoretical pI: Translated: 3.69; Mature: 3.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLHEETILCPYCNESIVILVDHEDREQEYIDDCSVCCRPIRIQVTTNDNDELVVTVCD CCCCCCCEEECCCCCCEEEEEECCCCCCHHHHCCHHCCCCEEEEEEEECCCCEEEEEEEC ENEA CCCC >Mature Secondary Structure MEFLHEETILCPYCNESIVILVDHEDREQEYIDDCSVCCRPIRIQVTTNDNDELVVTVCD CCCCCCCEEECCCCCCEEEEEECCCCCCHHHHCCHHCCCCEEEEEEEECCCCEEEEEEEC ENEA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA