Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694968

Identifier: 209694968

GI number: 209694968

Start: 1569431

End: 1570042

Strand: Direct

Name: 209694968

Synonym: VSAL_I1451

Alternate gene names: NA

Gene position: 1569431-1570042 (Clockwise)

Preceding gene: 209694967

Following gene: 209694969

Centisome position: 47.2

GC content: 44.12

Gene sequence:

>612_bases
ATGAATGAACAACACCAGATCCGACAAGAAATTTATGGCTTATTAGCGCATTTATTCCGTTCAGCACCAGAGCAAGCATT
GGTTGATTGGTTAGTCACCATAGAAACGGAGCAGAGCGAAACCCACGGCATGAGTCAAGCGTGGAGCCAATTGGTTAAGG
CGGCAGAGCAAGCCAGCCTTAACGACACGCTAGAAAAACTAGAAGACGAATACCAAAACCTATTTATTGGTGTTGGCCGC
GGTGAAGTGATGCAATTTGGATCATGGCACATTGCGGGAGCATTAATGGAAAAACCATTAGTCGCACTTCGCCAAGACCT
AATGCAGTTGGGTTTTGAACGCGCAGAAGACGTAAAAGAACCAGAAGACCATATCTCAGCATTATGCGAAGTGATGGCGA
TGTTGATAGAAGCAGGTGAGGCAGAAGTACTGCAACAACGTTTCTTTAATCGTCATATTCAACCTTGGTATGTCTCGCTG
TGTGATCAAATCAATAATGCTCAAAACGCCGATTTTTATAAATCAGTGGCGTGTTTAGCGGAAGCGTTCTTCACGGTAGA
ACAAACCCGTTTTGCAAAGAACCCAAATGAGATTGAAGTGACTGCGATTTAA

Upstream 100 bases:

>100_bases
GCTTCAATCAACCGTCTATACATGTGCGAAGACTGTCGAGTAAAAGACATCTTTATCGACTTATCAGCAAATCCAGAAAA
ACAATTAAAGGTCTAATACC

Downstream 100 bases:

>100_bases
TTCGCGGTGACAAGAACAGAATTAAAACCATAAAAACAGACGCCCATTCCAAGTGAATTGGAAGCAAAGGAGCATAGCAT
GAGCAATAAAAAAACGGACC

Product: cytoplasmic chaperone TorD

Products: NA

Alternate protein names: Cytoplasmic Chaperone rD; Chaperone rD Family; Chaperone; RD Family Cytoplasmic Chaperone; RA Specific Chaperone; Cytoplasmic Chaperone rD Subfamily; Formate Dehydrogenase-Specific Chaperone; Chaperone Protein rD; Chaperone rD; Chaperone Protein rD Family; Multi-Domain Fusion Protein; Cytoplasmic Chaperone rd Family Protein

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNEQHQIRQEIYGLLAHLFRSAPEQALVDWLVTIETEQSETHGMSQAWSQLVKAAEQASLNDTLEKLEDEYQNLFIGVGR
GEVMQFGSWHIAGALMEKPLVALRQDLMQLGFERAEDVKEPEDHISALCEVMAMLIEAGEAEVLQQRFFNRHIQPWYVSL
CDQINNAQNADFYKSVACLAEAFFTVEQTRFAKNPNEIEVTAI

Sequences:

>Translated_203_residues
MNEQHQIRQEIYGLLAHLFRSAPEQALVDWLVTIETEQSETHGMSQAWSQLVKAAEQASLNDTLEKLEDEYQNLFIGVGR
GEVMQFGSWHIAGALMEKPLVALRQDLMQLGFERAEDVKEPEDHISALCEVMAMLIEAGEAEVLQQRFFNRHIQPWYVSL
CDQINNAQNADFYKSVACLAEAFFTVEQTRFAKNPNEIEVTAI
>Mature_203_residues
MNEQHQIRQEIYGLLAHLFRSAPEQALVDWLVTIETEQSETHGMSQAWSQLVKAAEQASLNDTLEKLEDEYQNLFIGVGR
GEVMQFGSWHIAGALMEKPLVALRQDLMQLGFERAEDVKEPEDHISALCEVMAMLIEAGEAEVLQQRFFNRHIQPWYVSL
CDQINNAQNADFYKSVACLAEAFFTVEQTRFAKNPNEIEVTAI

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23160; Mature: 23160

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQHQIRQEIYGLLAHLFRSAPEQALVDWLVTIETEQSETHGMSQAWSQLVKAAEQASL
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH
NDTLEKLEDEYQNLFIGVGRGEVMQFGSWHIAGALMEKPLVALRQDLMQLGFERAEDVKE
HHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEDHISALCEVMAMLIEAGEAEVLQQRFFNRHIQPWYVSLCDQINNAQNADFYKSVACLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
EAFFTVEQTRFAKNPNEIEVTAI
HHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MNEQHQIRQEIYGLLAHLFRSAPEQALVDWLVTIETEQSETHGMSQAWSQLVKAAEQASL
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH
NDTLEKLEDEYQNLFIGVGRGEVMQFGSWHIAGALMEKPLVALRQDLMQLGFERAEDVKE
HHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEDHISALCEVMAMLIEAGEAEVLQQRFFNRHIQPWYVSLCDQINNAQNADFYKSVACLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
EAFFTVEQTRFAKNPNEIEVTAI
HHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA