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The map label for this gene is yeeZ [H]

Identifier: 209694942

GI number: 209694942

Start: 1535018

End: 1535806

Strand: Direct

Name: yeeZ [H]

Synonym: VSAL_I1420

Alternate gene names: 209694942

Gene position: 1535018-1535806 (Clockwise)

Preceding gene: 209694941

Following gene: 209694943

Centisome position: 46.16

GC content: 37.52

Gene sequence:

>789_bases
ATGACATCAATTAGTATTTTAGGTTGTGGTTGGTTAGGACTGCCATTAGCAAAACAGTTAGTCGAGTGCGGCTTTAGTGT
TAAAGGCTCTGTCAGAAGTGAAGAAAAAGCACATAGCTTAAACGAATTCTCTGTGACTCCGTTTATTTTGAATATTGATG
ATGCAACAACAGATCAACAATGGGATGAGTTTTTGGGATCAGAGATATTGATTATAGCGATACCGTCAAAAAATACAGAC
GGGTTTATGTCGTTAATCTCAGCATTGGAAAAATCATTCGTTAAGCGGGTAATTTTTGTTAGTTCTACATCGGTATATAA
AGACACTAACGATGTGGTTTTTGAATCCGAAGCGGCGCAAGACTCTTCTACTTTATATCAAATTGAAACGCTATTTACTC
AATCTGTTTTTTTCGCTACAACCGTAGTTCGATTCAGTGGGTTGGTGGGGTATTCTCGTAATCCAGGTAGATTCTTTCAA
AAAAGTGGGCGTTCGGTGAGTAACCCTGATGCGGCAGTGAGCATGATTCATCAAGATGATTGCATTGGTTTGATTGAACA
GATCATAAAACAAAACCAATGGGGTCAAACGTTTAATGCTTGTGCAGATACGCATCCGACAAAGCGTGAATTTTATACTG
AAATGACGCAGCGCATTGGTGTAGACACCCCAACATTTATTGAATCAGAAAACCAAACTTTTAAACTTATTAGCAATCAG
AAGATTAAAGAAGCACTAGGGTATGAATTTATTTACCCTGATGTAATGCAAATTACTTATGACGAATAA

Upstream 100 bases:

>100_bases
CACAAGCTGAAGGGTATTACCCAAAAATTGGTTTCGAAGCACACAATAGTGCGTGGGTCTTATCTGATGAAAGTCAATTG
AAGCTTTATTAAGGATAATC

Downstream 100 bases:

>100_bases
AATCATTAATTAAGGAGAATATAATGAACAATCCTTTAGTTACAACAGATTGGTTAGCTGCTCATATCAATGATGAAAAC
ATTGTTATTGTTGATGCGTA

Product: hypothetical protein

Products: dTDP-4-dehydro-6-deoxy-D-glucose; H2O

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTSISILGCGWLGLPLAKQLVECGFSVKGSVRSEEKAHSLNEFSVTPFILNIDDATTDQQWDEFLGSEILIIAIPSKNTD
GFMSLISALEKSFVKRVIFVSSTSVYKDTNDVVFESEAAQDSSTLYQIETLFTQSVFFATTVVRFSGLVGYSRNPGRFFQ
KSGRSVSNPDAAVSMIHQDDCIGLIEQIIKQNQWGQTFNACADTHPTKREFYTEMTQRIGVDTPTFIESENQTFKLISNQ
KIKEALGYEFIYPDVMQITYDE

Sequences:

>Translated_262_residues
MTSISILGCGWLGLPLAKQLVECGFSVKGSVRSEEKAHSLNEFSVTPFILNIDDATTDQQWDEFLGSEILIIAIPSKNTD
GFMSLISALEKSFVKRVIFVSSTSVYKDTNDVVFESEAAQDSSTLYQIETLFTQSVFFATTVVRFSGLVGYSRNPGRFFQ
KSGRSVSNPDAAVSMIHQDDCIGLIEQIIKQNQWGQTFNACADTHPTKREFYTEMTQRIGVDTPTFIESENQTFKLISNQ
KIKEALGYEFIYPDVMQITYDE
>Mature_261_residues
TSISILGCGWLGLPLAKQLVECGFSVKGSVRSEEKAHSLNEFSVTPFILNIDDATTDQQWDEFLGSEILIIAIPSKNTDG
FMSLISALEKSFVKRVIFVSSTSVYKDTNDVVFESEAAQDSSTLYQIETLFTQSVFFATTVVRFSGLVGYSRNPGRFFQK
SGRSVSNPDAAVSMIHQDDCIGLIEQIIKQNQWGQTFNACADTHPTKREFYTEMTQRIGVDTPTFIESENQTFKLISNQK
IKEALGYEFIYPDVMQITYDE

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788327, Length=271, Percent_Identity=27.6752767527675, Blast_Score=131, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: 4.2.1.46

Molecular weight: Translated: 29381; Mature: 29250

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSISILGCGWLGLPLAKQLVECGFSVKGSVRSEEKAHSLNEFSVTPFILNIDDATTDQQ
CCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEECCEEEEECCCCCCHHH
WDEFLGSEILIIAIPSKNTDGFMSLISALEKSFVKRVIFVSSTSVYKDTNDVVFESEAAQ
HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCEECCCCCEEEECCCCC
DSSTLYQIETLFTQSVFFATTVVRFSGLVGYSRNPGRFFQKSGRSVSNPDAAVSMIHQDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHH
CIGLIEQIIKQNQWGQTFNACADTHPTKREFYTEMTQRIGVDTPTFIESENQTFKLISNQ
HHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCEEEECCCH
KIKEALGYEFIYPDVMQITYDE
HHHHHHCCEEECCCEEEEEECC
>Mature Secondary Structure 
TSISILGCGWLGLPLAKQLVECGFSVKGSVRSEEKAHSLNEFSVTPFILNIDDATTDQQ
CCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEECCEEEEECCCCCCHHH
WDEFLGSEILIIAIPSKNTDGFMSLISALEKSFVKRVIFVSSTSVYKDTNDVVFESEAAQ
HHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCEECCCCCEEEECCCCC
DSSTLYQIETLFTQSVFFATTVVRFSGLVGYSRNPGRFFQKSGRSVSNPDAAVSMIHQDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHH
CIGLIEQIIKQNQWGQTFNACADTHPTKREFYTEMTQRIGVDTPTFIESENQTFKLISNQ
HHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCEEEECCCH
KIKEALGYEFIYPDVMQITYDE
HHHHHHCCEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dTDPglucose

Specific reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-D-glucose + H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]