Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209694941
Identifier: 209694941
GI number: 209694941
Start: 1534590
End: 1535009
Strand: Direct
Name: 209694941
Synonym: VSAL_I1419
Alternate gene names: NA
Gene position: 1534590-1535009 (Clockwise)
Preceding gene: 209694940
Following gene: 209694942
Centisome position: 46.15
GC content: 38.57
Gene sequence:
>420_bases ATGGAAATCGATTATAAAGTAAATGAACCAATGAGTGCTGAGCAGTTTATTGAATTATTGAAGAAAACGACTCTTGGTGC TCGAAGACCAATTGATGATGTAGCAAGAATACAAGCGATGTTAGATAACTCTAATTTGATTGTCACCGCGTGGGGCGATG GCGAATTAATTGGCGTTGCTCGTTCTGTCACGGATTTTAATTTTTGTTGTTATCTTTCTGATTTAGCTGTTGATGAAAGT GTGCAATCAATGGGGGTTGGAAAATATCTCATTCTGGTGACGAAGGAAGAGGTATCTCCTGAGTGCAAGTTAATATTACT TTCAGCGCCACAAGCTGAAGGGTATTACCCAAAAATTGGTTTCGAAGCACACAATAGTGCGTGGGTCTTATCTGATGAAA GTCAATTGAAGCTTTATTAA
Upstream 100 bases:
>100_bases CAAGATTATTTTGATGAGGGTGAGCATCGTTTTGTACTTGCTATGGATATATCACAATAATTTGGTGTCGTAACAATAGG GTAATTAAGAAGAGATATTC
Downstream 100 bases:
>100_bases GGATAATCATGACATCAATTAGTATTTTAGGTTGTGGTTGGTTAGGACTGCCATTAGCAAAACAGTTAGTCGAGTGCGGC TTTAGTGTTAAAGGCTCTGT
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Protein Export Cytoplasm Protein SecA ATPase RNA Helicase; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MEIDYKVNEPMSAEQFIELLKKTTLGARRPIDDVARIQAMLDNSNLIVTAWGDGELIGVARSVTDFNFCCYLSDLAVDES VQSMGVGKYLILVTKEEVSPECKLILLSAPQAEGYYPKIGFEAHNSAWVLSDESQLKLY
Sequences:
>Translated_139_residues MEIDYKVNEPMSAEQFIELLKKTTLGARRPIDDVARIQAMLDNSNLIVTAWGDGELIGVARSVTDFNFCCYLSDLAVDES VQSMGVGKYLILVTKEEVSPECKLILLSAPQAEGYYPKIGFEAHNSAWVLSDESQLKLY >Mature_139_residues MEIDYKVNEPMSAEQFIELLKKTTLGARRPIDDVARIQAMLDNSNLIVTAWGDGELIGVARSVTDFNFCCYLSDLAVDES VQSMGVGKYLILVTKEEVSPECKLILLSAPQAEGYYPKIGFEAHNSAWVLSDESQLKLY
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15483; Mature: 15483
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIDYKVNEPMSAEQFIELLKKTTLGARRPIDDVARIQAMLDNSNLIVTAWGDGELIGVA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEE RSVTDFNFCCYLSDLAVDESVQSMGVGKYLILVTKEEVSPECKLILLSAPQAEGYYPKIG ECCCCCEEEEEEECHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC FEAHNSAWVLSDESQLKLY EECCCCEEEEECCCEEEEC >Mature Secondary Structure MEIDYKVNEPMSAEQFIELLKKTTLGARRPIDDVARIQAMLDNSNLIVTAWGDGELIGVA CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEEEE RSVTDFNFCCYLSDLAVDESVQSMGVGKYLILVTKEEVSPECKLILLSAPQAEGYYPKIG ECCCCCEEEEEEECHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCC FEAHNSAWVLSDESQLKLY EECCCCEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA