Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694903

Identifier: 209694903

GI number: 209694903

Start: 1495877

End: 1496020

Strand: Direct

Name: 209694903

Synonym: VSAL_I1376

Alternate gene names: NA

Gene position: 1495877-1496020 (Clockwise)

Preceding gene: 209694902

Following gene: 209694904

Centisome position: 44.99

GC content: 34.72

Gene sequence:

>144_bases
TTGACTAAAATGATCTCCGAAAGTCATTTATTTACGGTTCGTTTAGTGGATCCAATGTCCTTTATTGATTTTCTATTTCT
GCATAAGTCGGATTCTGGAATCGTATATTTAGGCTATTTATTAGGTGAGATCTTCTGGTGGTGA

Upstream 100 bases:

>100_bases
ATTTATTGGCTTCTATTGTTGATTTACTTTCTCCTTCGGTTGTTCAAGCTCTTCCTCCCTATTTTTAAAACATGAATACT
CATTCCGATGCTAATTTTGG

Downstream 100 bases:

>100_bases
GTTGTTTACGGATGAATAAACAGTTGCAGTGAAAGGGTGTTAATAGATAAGTTGATTGTGGGCGTTGATGTGGAAAATAT
CATATCTGCGAAGCGATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MTKMISESHLFTVRLVDPMSFIDFLFLHKSDSGIVYLGYLLGEIFWW

Sequences:

>Translated_47_residues
MTKMISESHLFTVRLVDPMSFIDFLFLHKSDSGIVYLGYLLGEIFWW
>Mature_46_residues
TKMISESHLFTVRLVDPMSFIDFLFLHKSDSGIVYLGYLLGEIFWW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5585; Mature: 5453

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKMISESHLFTVRLVDPMSFIDFLFLHKSDSGIVYLGYLLGEIFWW
CCCCCCCCCEEEEEEECHHHHHHHHEEECCCCCEEEHHHHHHHHHCC
>Mature Secondary Structure 
TKMISESHLFTVRLVDPMSFIDFLFLHKSDSGIVYLGYLLGEIFWW
CCCCCCCCEEEEEEECHHHHHHHHEEECCCCCEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA