The gene/protein map for NC_009800 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694887

Identifier: 209694887

GI number: 209694887

Start: 1475814

End: 1478078

Strand: Direct

Name: 209694887

Synonym: VSAL_I1358

Alternate gene names: NA

Gene position: 1475814-1478078 (Clockwise)

Preceding gene: 209694886

Following gene: 209694888

Centisome position: 44.38

GC content: 43.31

Gene sequence:

>2265_bases
ATGGCTAATGAGGTCGAGTTTAAGTTTGAAGTCCTTGGCACGAATCATGAATTTCGTGTTGAGAGTTTCAATGTGGTCGA
AGAGGTATCCCAACCTTTTAAAATAACCTTGTCGTTATTGTCATTAGACCCTGATATAGCGTTTGATGTATTAAGCCGAA
AACCCGCATTATTAACCGTTCTTGGGCAAGGAATGAATGCCGGACGATTATTTCATGGTGTCGTAAATGAAGTTCGGTAT
TTAGGCGCAGGTCGTCGTTTCTCTCATTATCAAATTACGCTCGTACCTCAACTGTGGTTTTTAACCCAACGCCAAGATTG
TCGTATTTTCCAAGATAAGTCGATTGTTGATATTTTAACTGAAGTGCTCGATGGGGCGTCAGTGACTGATTATCGCTTTG
AACTGTCTAATACCTATCCCAACCAAGAATACTTACTTCAATATCGTGAAACTGACAGTCATTTTGTTCAGCGTTTATTA
GCAGAGCACGGTTTATGGTATTACTTCGAACATACTACAAGTAACCATAGCATGGTGATTATTGATAAAAATGATGCCAT
TCCAGAGTTAATTAGTACTCCTCTAAACGCGTCTTATATTGGCCCTTTGGTGTACCAATCTGAAGGAGGTGGTAATGCTG
ACAGAGAGCATATATTTGAGTTAAGCAGCTATAACCGTGTTCGTACTGGTCATGTAATTCAAACCGATTATAACTACGAT
CAACCCCGCATCCCACAACAAGTGCAACAACAGGGTGATCGAGATACTGATTTAGCATTCTTTGATTACCCAGGACGCTA
TGGGGAAAGCGTAGAAGGCCAACAACGTAGCAATTACCTTATCGCTGATCATCAGGTTGAAAATCATCAAATTGAAGCCG
AAAGTAACATTATGCGTTTAACTGCTGGTTATAGTTTTGATTTGGCAAAGCACCCAAGAAACGCAATCAATCGAGATTAC
ACGCTCACAGCGATAACGCACAGTGGTTATAACCCACAAGTGCACGAAGAAGAATCAAGTGGTCTGCCGACGACGTATCA
AAACTATTTTAATTGTATTCCTCGCGATGTTGGCTATAAAGCACCTAAATTAGCCGCCCCAGTGGTTGATGGCCCTCAGA
CGGCAGTCGTGGTTGGCCCCGCAGGAGAAGAAATATATACCGATCCAATGGGACGTATTAAAGTCCAATTTCACTGGGAT
CGTTATGGTAACAACGATGAGCATTCAGGTTGTTGGCTTCGTGTTAGTCAATCGATGGCCGCGCCAACGTGGGGCGCGGT
GTATTTACCGAGAATAGGGCACGAAGTGGTGGTGACCTTCTTAGAGGGAGATCCAGACAGACCCTTAGTGACAGGTGCGG
TATACAACGGCTTACACACGCCCCCTTATGCCTTGCCAGAGCATAAAACCAAAACGGTATTTCGGACTCAAACCCACAAA
GGGGAAGGGTACAACGAAATGTCGTTTGAAGACGAAGCCAATCAAGAAGAAGTTTATTTTCATGCTCAGAAAGACATGAG
AACTAAGGTTCTAAATAACCGATTCAGAACCATAGGGAATGATGAAGAGTTAGAAGTTGGACGTAACCAAGAAAACATCA
TTAACAAAGACAGAAAAGAAACCATAGAAGGCCATAAAACATCAATAACAAACCAAACCTTCTCAGAAACCGTCGAGCAA
GACGTAACGGTTAAATACAACGCCAACATAGAAAAGAGCGTGGCTGTTGAACAGACGTTGACAATCTACGAAAACCGACA
GAGTACGATAGGTAAGAACGACGAACTCACGATTAAAGGCGAACAAAGCCGCATTACTATGGGAGCAAGTAGCAGTGATA
TTAGCGCTGACGATACGCTAACCGTTGGTCAGAATCTCACAATAGAAGTCGGAAATAATGCATCCATTAAATCGGATGCT
GACCATACCATAATCAGTGCCGATGAAATTACGGCTCAGGTGGGAAGCTCGGGTTTTATTCTAAAAAATAACGGCACCAT
TACCTTGTATGGCTCAGATATTACGGTTGATGGCTCTGGCTCGGTCGCCTTGGTTGGGGGAAATGTTGCGATTAACCCTG
GCGCAGCATCTAGTCAAAGTAGCAGTGTAAGCGCGAACCTTCCTCGTACCTTCTCAATGTCACCATTAGCATCAACCAAA
CCAGTGATGAATTCAGCGGCGTACAGTGAAATGGTTGAAGATGGCGCATTAATGAAAGAGTTATGCCAATGTGGTAAGGA
GGGCATATGCAAGCTGCACAGCTAA

Upstream 100 bases:

>100_bases
TGGCGTAAGCCACGCGAAGCGTAATTGCCTCGAAAATCATTTATAAAAACTAGGGCCTCATGTTGGCCCTATTTGTCGTT
ATACTTATCAGGTGAATACA

Downstream 100 bases:

>100_bases
ATAATGAATGGCGAGTAAATTCTGTTGAAGTGCCATTATTTTCTGCATCAGAAAGTATTTATGCATTTATTGAACCGGAG
TTATGGCCTGAGTGGAATGC

Product: VgrG preotein, VgrG-2

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; VgrG-Like Protein; RHS Accessory Genetic Element; Vgr Protein; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 754; Mature: 753

Protein sequence:

>754_residues
MANEVEFKFEVLGTNHEFRVESFNVVEEVSQPFKITLSLLSLDPDIAFDVLSRKPALLTVLGQGMNAGRLFHGVVNEVRY
LGAGRRFSHYQITLVPQLWFLTQRQDCRIFQDKSIVDILTEVLDGASVTDYRFELSNTYPNQEYLLQYRETDSHFVQRLL
AEHGLWYYFEHTTSNHSMVIIDKNDAIPELISTPLNASYIGPLVYQSEGGGNADREHIFELSSYNRVRTGHVIQTDYNYD
QPRIPQQVQQQGDRDTDLAFFDYPGRYGESVEGQQRSNYLIADHQVENHQIEAESNIMRLTAGYSFDLAKHPRNAINRDY
TLTAITHSGYNPQVHEEESSGLPTTYQNYFNCIPRDVGYKAPKLAAPVVDGPQTAVVVGPAGEEIYTDPMGRIKVQFHWD
RYGNNDEHSGCWLRVSQSMAAPTWGAVYLPRIGHEVVVTFLEGDPDRPLVTGAVYNGLHTPPYALPEHKTKTVFRTQTHK
GEGYNEMSFEDEANQEEVYFHAQKDMRTKVLNNRFRTIGNDEELEVGRNQENIINKDRKETIEGHKTSITNQTFSETVEQ
DVTVKYNANIEKSVAVEQTLTIYENRQSTIGKNDELTIKGEQSRITMGASSSDISADDTLTVGQNLTIEVGNNASIKSDA
DHTIISADEITAQVGSSGFILKNNGTITLYGSDITVDGSGSVALVGGNVAINPGAASSQSSSVSANLPRTFSMSPLASTK
PVMNSAAYSEMVEDGALMKELCQCGKEGICKLHS

Sequences:

>Translated_754_residues
MANEVEFKFEVLGTNHEFRVESFNVVEEVSQPFKITLSLLSLDPDIAFDVLSRKPALLTVLGQGMNAGRLFHGVVNEVRY
LGAGRRFSHYQITLVPQLWFLTQRQDCRIFQDKSIVDILTEVLDGASVTDYRFELSNTYPNQEYLLQYRETDSHFVQRLL
AEHGLWYYFEHTTSNHSMVIIDKNDAIPELISTPLNASYIGPLVYQSEGGGNADREHIFELSSYNRVRTGHVIQTDYNYD
QPRIPQQVQQQGDRDTDLAFFDYPGRYGESVEGQQRSNYLIADHQVENHQIEAESNIMRLTAGYSFDLAKHPRNAINRDY
TLTAITHSGYNPQVHEEESSGLPTTYQNYFNCIPRDVGYKAPKLAAPVVDGPQTAVVVGPAGEEIYTDPMGRIKVQFHWD
RYGNNDEHSGCWLRVSQSMAAPTWGAVYLPRIGHEVVVTFLEGDPDRPLVTGAVYNGLHTPPYALPEHKTKTVFRTQTHK
GEGYNEMSFEDEANQEEVYFHAQKDMRTKVLNNRFRTIGNDEELEVGRNQENIINKDRKETIEGHKTSITNQTFSETVEQ
DVTVKYNANIEKSVAVEQTLTIYENRQSTIGKNDELTIKGEQSRITMGASSSDISADDTLTVGQNLTIEVGNNASIKSDA
DHTIISADEITAQVGSSGFILKNNGTITLYGSDITVDGSGSVALVGGNVAINPGAASSQSSSVSANLPRTFSMSPLASTK
PVMNSAAYSEMVEDGALMKELCQCGKEGICKLHS
>Mature_753_residues
ANEVEFKFEVLGTNHEFRVESFNVVEEVSQPFKITLSLLSLDPDIAFDVLSRKPALLTVLGQGMNAGRLFHGVVNEVRYL
GAGRRFSHYQITLVPQLWFLTQRQDCRIFQDKSIVDILTEVLDGASVTDYRFELSNTYPNQEYLLQYRETDSHFVQRLLA
EHGLWYYFEHTTSNHSMVIIDKNDAIPELISTPLNASYIGPLVYQSEGGGNADREHIFELSSYNRVRTGHVIQTDYNYDQ
PRIPQQVQQQGDRDTDLAFFDYPGRYGESVEGQQRSNYLIADHQVENHQIEAESNIMRLTAGYSFDLAKHPRNAINRDYT
LTAITHSGYNPQVHEEESSGLPTTYQNYFNCIPRDVGYKAPKLAAPVVDGPQTAVVVGPAGEEIYTDPMGRIKVQFHWDR
YGNNDEHSGCWLRVSQSMAAPTWGAVYLPRIGHEVVVTFLEGDPDRPLVTGAVYNGLHTPPYALPEHKTKTVFRTQTHKG
EGYNEMSFEDEANQEEVYFHAQKDMRTKVLNNRFRTIGNDEELEVGRNQENIINKDRKETIEGHKTSITNQTFSETVEQD
VTVKYNANIEKSVAVEQTLTIYENRQSTIGKNDELTIKGEQSRITMGASSSDISADDTLTVGQNLTIEVGNNASIKSDAD
HTIISADEITAQVGSSGFILKNNGTITLYGSDITVDGSGSVALVGGNVAINPGAASSQSSSVSANLPRTFSMSPLASTKP
VMNSAAYSEMVEDGALMKELCQCGKEGICKLHS

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84158; Mature: 84027

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANEVEFKFEVLGTNHEFRVESFNVVEEVSQPFKITLSLLSLDPDIAFDVLSRKPALLTV
CCCCEEEEEEEECCCCEEEEECHHHHHHCCCCEEEEEEEEECCCCHHHHHHCCCCEEEEE
LGQGMNAGRLFHGVVNEVRYLGAGRRFSHYQITLVPQLWFLTQRQDCRIFQDKSIVDILT
ECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCEEECCCCHHHHHH
EVLDGASVTDYRFELSNTYPNQEYLLQYRETDSHFVQRLLAEHGLWYYFEHTTSNHSMVI
HHHCCCCEEEEEEEECCCCCCHHHEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEEE
IDKNDAIPELISTPLNASYIGPLVYQSEGGGNADREHIFELSSYNRVRTGHVIQTDYNYD
EECCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEECCCEEEECCCCC
QPRIPQQVQQQGDRDTDLAFFDYPGRYGESVEGQQRSNYLIADHQVENHQIEAESNIMRL
CCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEE
TAGYSFDLAKHPRNAINRDYTLTAITHSGYNPQVHEEESSGLPTTYQNYFNCIPRDVGYK
ECCCEEEHHHCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCC
APKLAAPVVDGPQTAVVVGPAGEEIYTDPMGRIKVQFHWDRYGNNDEHSGCWLRVSQSMA
CCCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCC
APTWGAVYLPRIGHEVVVTFLEGDPDRPLVTGAVYNGLHTPPYALPEHKTKTVFRTQTHK
CCCCCEEECCCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCCCCEEEEEECCC
GEGYNEMSFEDEANQEEVYFHAQKDMRTKVLNNRFRTIGNDEELEVGRNQENIINKDRKE
CCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCCHHH
TIEGHKTSITNQTFSETVEQDVTVKYNANIEKSVAVEQTLTIYENRQSTIGKNDELTIKG
HHCCCHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHEEEEEECCHHHCCCCCEEEEEC
EQSRITMGASSSDISADDTLTVGQNLTIEVGNNASIKSDADHTIISADEITAQVGSSGFI
CCCEEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEEHHHHHHHCCCCCEE
LKNNGTITLYGSDITVDGSGSVALVGGNVAINPGAASSQSSSVSANLPRTFSMSPLASTK
EECCCEEEEEECEEEECCCCCEEEECCCEEECCCCCCCCCCCEECCCCCEECCCCCCCCC
PVMNSAAYSEMVEDGALMKELCQCGKEGICKLHS
HHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure 
ANEVEFKFEVLGTNHEFRVESFNVVEEVSQPFKITLSLLSLDPDIAFDVLSRKPALLTV
CCCEEEEEEEECCCCEEEEECHHHHHHCCCCEEEEEEEEECCCCHHHHHHCCCCEEEEE
LGQGMNAGRLFHGVVNEVRYLGAGRRFSHYQITLVPQLWFLTQRQDCRIFQDKSIVDILT
ECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCEEECCCCHHHHHH
EVLDGASVTDYRFELSNTYPNQEYLLQYRETDSHFVQRLLAEHGLWYYFEHTTSNHSMVI
HHHCCCCEEEEEEEECCCCCCHHHEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCEEEE
IDKNDAIPELISTPLNASYIGPLVYQSEGGGNADREHIFELSSYNRVRTGHVIQTDYNYD
EECCCCCHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCEEECCCEEEECCCCC
QPRIPQQVQQQGDRDTDLAFFDYPGRYGESVEGQQRSNYLIADHQVENHQIEAESNIMRL
CCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCEEEE
TAGYSFDLAKHPRNAINRDYTLTAITHSGYNPQVHEEESSGLPTTYQNYFNCIPRDVGYK
ECCCEEEHHHCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCC
APKLAAPVVDGPQTAVVVGPAGEEIYTDPMGRIKVQFHWDRYGNNDEHSGCWLRVSQSMA
CCCCCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCC
APTWGAVYLPRIGHEVVVTFLEGDPDRPLVTGAVYNGLHTPPYALPEHKTKTVFRTQTHK
CCCCCEEECCCCCCEEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCCCCEEEEEECCC
GEGYNEMSFEDEANQEEVYFHAQKDMRTKVLNNRFRTIGNDEELEVGRNQENIINKDRKE
CCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCCHHH
TIEGHKTSITNQTFSETVEQDVTVKYNANIEKSVAVEQTLTIYENRQSTIGKNDELTIKG
HHCCCHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHEEEEEECCHHHCCCCCEEEEEC
EQSRITMGASSSDISADDTLTVGQNLTIEVGNNASIKSDADHTIISADEITAQVGSSGFI
CCCEEEECCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCEEEEHHHHHHHCCCCCEE
LKNNGTITLYGSDITVDGSGSVALVGGNVAINPGAASSQSSSVSANLPRTFSMSPLASTK
EECCCEEEEEECEEEECCCCCEEEECCCEEECCCCCCCCCCCEECCCCCEECCCCCCCCC
PVMNSAAYSEMVEDGALMKELCQCGKEGICKLHS
HHHHHHHHHHHHHCCHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA