Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yehS [H]

Identifier: 209694854

GI number: 209694854

Start: 1434291

End: 1434785

Strand: Direct

Name: yehS [H]

Synonym: VSAL_I1323

Alternate gene names: 209694854

Gene position: 1434291-1434785 (Clockwise)

Preceding gene: 209694853

Following gene: 209694857

Centisome position: 43.13

GC content: 35.96

Gene sequence:

>495_bases
TTGACTAATAACGACGTTCTACGACGCATTCGCTATACTTTTGATTTCGACGATACAAAAATGATCGCCCTATTTGGTGC
AGCAGATCTTAAAGTAACTCGTGAAGAAGTATGTAACTGGTTAAAATCAGACGAAGATAAAGATTACAAAAGCTGTCAAG
ATGTTCAATTAGCAACGTTTCTAAATGGTTTCATCAATGATCGACGTGGTAAGCGTGAAGGCGAGCAACCAAAGCCAGAG
CAAAAACTAACGAACAACATTATTCTTAAAAAATTACAGATTGCTTTGAATTTAAAAGCGGATGAAGTATTAGACTTAAT
GAAGTTAGTTAACTTCCGTCTAAGTAAGCATGAATTGAGTGCATTCTTCCGTAAAGCCGATCATAAACACTACCGTATTT
GTAAAGATCAAGTGTTACGTAACTTCCTACAAGGCGTTCAATTTGATTTACGTGGTGAAGTAACAGAAGAAGATGAAGAA
AACGAAAGCGAATAA

Upstream 100 bases:

>100_bases
CTCGGGTTTTTTATATCCAGAAACGACATAAATCTTTTACCTATCTACATTACGAGTTATAGTCTGCCTCTAATTTATAT
TAAGACATTTAGGATTTACC

Downstream 100 bases:

>100_bases
GCGTTTTTTCTTCTCACCATAATAAAAAACCACGATGTCATTTACTGAATCGTGGTTTTTTTATGTGCGTTATTTTAGTT
TCGTTTCTACATTAGAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATFLNGFINDRRGKREGEQPKPE
QKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELSAFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEE
NESE

Sequences:

>Translated_164_residues
MTNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATFLNGFINDRRGKREGEQPKPE
QKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELSAFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEE
NESE
>Mature_163_residues
TNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATFLNGFINDRRGKREGEQPKPEQ
KLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELSAFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEEN
ESE

Specific function: Unknown

COG id: COG4807

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788443, Length=147, Percent_Identity=38.0952380952381, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009921 [H]

Pfam domain/function: PF07308 DUF1456 [H]

EC number: NA

Molecular weight: Translated: 19346; Mature: 19215

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATF
CCCHHHHHHHHHHCCCCCCEEEEEECCCCHHEHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LNGFINDRRGKREGEQPKPEQKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELS
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEENESE
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATF
CCHHHHHHHHHHCCCCCCEEEEEECCCCHHEHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LNGFINDRRGKREGEQPKPEQKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELS
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEENESE
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]