Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is yehS [H]
Identifier: 209694854
GI number: 209694854
Start: 1434291
End: 1434785
Strand: Direct
Name: yehS [H]
Synonym: VSAL_I1323
Alternate gene names: 209694854
Gene position: 1434291-1434785 (Clockwise)
Preceding gene: 209694853
Following gene: 209694857
Centisome position: 43.13
GC content: 35.96
Gene sequence:
>495_bases TTGACTAATAACGACGTTCTACGACGCATTCGCTATACTTTTGATTTCGACGATACAAAAATGATCGCCCTATTTGGTGC AGCAGATCTTAAAGTAACTCGTGAAGAAGTATGTAACTGGTTAAAATCAGACGAAGATAAAGATTACAAAAGCTGTCAAG ATGTTCAATTAGCAACGTTTCTAAATGGTTTCATCAATGATCGACGTGGTAAGCGTGAAGGCGAGCAACCAAAGCCAGAG CAAAAACTAACGAACAACATTATTCTTAAAAAATTACAGATTGCTTTGAATTTAAAAGCGGATGAAGTATTAGACTTAAT GAAGTTAGTTAACTTCCGTCTAAGTAAGCATGAATTGAGTGCATTCTTCCGTAAAGCCGATCATAAACACTACCGTATTT GTAAAGATCAAGTGTTACGTAACTTCCTACAAGGCGTTCAATTTGATTTACGTGGTGAAGTAACAGAAGAAGATGAAGAA AACGAAAGCGAATAA
Upstream 100 bases:
>100_bases CTCGGGTTTTTTATATCCAGAAACGACATAAATCTTTTACCTATCTACATTACGAGTTATAGTCTGCCTCTAATTTATAT TAAGACATTTAGGATTTACC
Downstream 100 bases:
>100_bases GCGTTTTTTCTTCTCACCATAATAAAAAACCACGATGTCATTTACTGAATCGTGGTTTTTTTATGTGCGTTATTTTAGTT TCGTTTCTACATTAGAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATFLNGFINDRRGKREGEQPKPE QKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELSAFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEE NESE
Sequences:
>Translated_164_residues MTNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATFLNGFINDRRGKREGEQPKPE QKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELSAFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEE NESE >Mature_163_residues TNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATFLNGFINDRRGKREGEQPKPEQ KLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELSAFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEEN ESE
Specific function: Unknown
COG id: COG4807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788443, Length=147, Percent_Identity=38.0952380952381, Blast_Score=128, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009921 [H]
Pfam domain/function: PF07308 DUF1456 [H]
EC number: NA
Molecular weight: Translated: 19346; Mature: 19215
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATF CCCHHHHHHHHHHCCCCCCEEEEEECCCCHHEHHHHHHHHHHCCCCCCHHHHHHHHHHHH LNGFINDRRGKREGEQPKPEQKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELS HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEENESE HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNNDVLRRIRYTFDFDDTKMIALFGAADLKVTREEVCNWLKSDEDKDYKSCQDVQLATF CCHHHHHHHHHHCCCCCCEEEEEECCCCHHEHHHHHHHHHHCCCCCCHHHHHHHHHHHH LNGFINDRRGKREGEQPKPEQKLTNNIILKKLQIALNLKADEVLDLMKLVNFRLSKHELS HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AFFRKADHKHYRICKDQVLRNFLQGVQFDLRGEVTEEDEENESE HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]