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The map label for this gene is ybaL [H]

Identifier: 209694407

GI number: 209694407

Start: 921693

End: 923276

Strand: Reverse

Name: ybaL [H]

Synonym: VSAL_I0828

Alternate gene names: 209694407

Gene position: 923276-921693 (Counterclockwise)

Preceding gene: 209694408

Following gene: 209694406

Centisome position: 27.77

GC content: 37.31

Gene sequence:

>1584_bases
ATGGAGTTGCTCTTTATTATCGCAGCCTTTGTTATGGGCTTTATCGCACTAAAAATTAATTTACCTCCATTGGTAGGCTT
TTTATTAGCAGGGTTCGGCTTACACGCTTTCGGCTTTCAATCTAACGATACATTATCTACTTTTGCTGATCTTGGTGTCA
CTCTTCTCTTATTTTCTATTGGTTTAAAACTTGATATAAAAACACTACTAGCAAAAGAAATTTGGTTAGGTGCCACACTT
CATAATGTATTTTCAACCTTATTTTTCACCCTCGCATTATTAGGGTTAAAGTTACTTGGCATTACCATGCTAGCAAATAT
AGAAATAGCACAATTAGTGTTATTTGGCTTTGCTCTTTCTTTTTCTAGTACCGTTTTTGCAGTTAAAGCCTTACAAGAAA
AAGGGGAAATGAATGCAACCTATGGGACATTAGCCATTGGTATTCTGGTCATGCAGGATATTTTTGCTGTTGTATTCTTA
AGTGTATCGACTGGAAAAACCCCTGAAATCACCGCCCTTGCTTTATTTGCCCTTCCTTTATTTAGACCCCTTTTCTTCAA
ACTATTAGATTGGGCGGGTCATGGTGAGATGCTCGTACTCTATGGTATTTTCTTAGCGTTAGTCGCAGGAGCTGGTACAT
TTGAATTGGTTGGAATGAAACCGGATCTTGGCGCACTTATTTTAGGAATGCTACTCGCTGGCCATTCAAAAGCATCCGAG
TTATCTAAATCTCTATTTAACTTAAAAGAAATACTCCTTATTTGTTTCTTCTTAAATATAGGTTTATCAGCAGCACCTAC
GCTATCTGGACTGACTCTTGCTCTACTTCTCGTTTTATTACTTCCAGTAAAAGGATTTTTATATTTTATTATTATCAATA
AATTTAAATTCCGTGTACGTACTTCTTTACTCGCCTCCCTCACACTGTTTAATTACAGTGAGTTTGGTCTTATTGTTGGT
GGCCTGGCCTTTAAAATGGGTTGGTTACCAGGAGACACTCTAGTTGCCATCGCTATAGCCGTTTCTATATCATTTATTAT
TTCAGCGCCATTAAATAATTTCGGACACTCCATTTACCAACGATCTCGCCATTGGTTAAAAGAACATACCGCAGAAAAGC
TAAATTCAATGGATAAACTGATTAATCCAGGTAGAGCACAAATATTAATTTTAGGTATGGGTAGTATAGGTAGCGGTGCT
TACGATGAGCTTAAAGATAAATATGGGGATATTATTTTAGGCATAGAACTTAAAGACGATGCAGCAAAACATCATCAAGA
ACTAAGACGAAACGTGATCACTGGTGATGCTACCGATCCTGATTTTTGGGAACGCATTTTATCAACATCTCACGTTAAAC
TTGTTTTACTTGCGATGCCAAACCATCAAGGTAATCAATTTGCTTTAGAGCAACTAAAATCGAGAAATTACAAAGGACAA
ACCGCCGCAATTGCCGCTTATAATGACCAAATCGATGGCTTAGTAGAGCAAGGGGTTGATGCAGCCTTTAATATATACAA
TGAAGCAGGTAACGGTTTTGCTCGCCATGTCACAGAGCAACTTAACCCTAAATTCAATCAATAA

Upstream 100 bases:

>100_bases
ACAAAAATTATTAGATGAATAAGAACGAATAATTTTTGTCATGTTACTCTAAGGGCTGCATTTGCGGCCCTTTTTATTAC
TTTCAGGAAAATATATTTTT

Downstream 100 bases:

>100_bases
CGTTTTATTTATAATCACTCAAAAGATAGTCAAGCACATCAAATAGGAGGGGATGATATCAATTCCTTCTTATTTCCTTT
CGTTTTCCCTTCAAATCGAT

Product: sodium/hydrogen antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MELLFIIAAFVMGFIALKINLPPLVGFLLAGFGLHAFGFQSNDTLSTFADLGVTLLLFSIGLKLDIKTLLAKEIWLGATL
HNVFSTLFFTLALLGLKLLGITMLANIEIAQLVLFGFALSFSSTVFAVKALQEKGEMNATYGTLAIGILVMQDIFAVVFL
SVSTGKTPEITALALFALPLFRPLFFKLLDWAGHGEMLVLYGIFLALVAGAGTFELVGMKPDLGALILGMLLAGHSKASE
LSKSLFNLKEILLICFFLNIGLSAAPTLSGLTLALLLVLLLPVKGFLYFIIINKFKFRVRTSLLASLTLFNYSEFGLIVG
GLAFKMGWLPGDTLVAIAIAVSISFIISAPLNNFGHSIYQRSRHWLKEHTAEKLNSMDKLINPGRAQILILGMGSIGSGA
YDELKDKYGDIILGIELKDDAAKHHQELRRNVITGDATDPDFWERILSTSHVKLVLLAMPNHQGNQFALEQLKSRNYKGQ
TAAIAAYNDQIDGLVEQGVDAAFNIYNEAGNGFARHVTEQLNPKFNQ

Sequences:

>Translated_527_residues
MELLFIIAAFVMGFIALKINLPPLVGFLLAGFGLHAFGFQSNDTLSTFADLGVTLLLFSIGLKLDIKTLLAKEIWLGATL
HNVFSTLFFTLALLGLKLLGITMLANIEIAQLVLFGFALSFSSTVFAVKALQEKGEMNATYGTLAIGILVMQDIFAVVFL
SVSTGKTPEITALALFALPLFRPLFFKLLDWAGHGEMLVLYGIFLALVAGAGTFELVGMKPDLGALILGMLLAGHSKASE
LSKSLFNLKEILLICFFLNIGLSAAPTLSGLTLALLLVLLLPVKGFLYFIIINKFKFRVRTSLLASLTLFNYSEFGLIVG
GLAFKMGWLPGDTLVAIAIAVSISFIISAPLNNFGHSIYQRSRHWLKEHTAEKLNSMDKLINPGRAQILILGMGSIGSGA
YDELKDKYGDIILGIELKDDAAKHHQELRRNVITGDATDPDFWERILSTSHVKLVLLAMPNHQGNQFALEQLKSRNYKGQ
TAAIAAYNDQIDGLVEQGVDAAFNIYNEAGNGFARHVTEQLNPKFNQ
>Mature_527_residues
MELLFIIAAFVMGFIALKINLPPLVGFLLAGFGLHAFGFQSNDTLSTFADLGVTLLLFSIGLKLDIKTLLAKEIWLGATL
HNVFSTLFFTLALLGLKLLGITMLANIEIAQLVLFGFALSFSSTVFAVKALQEKGEMNATYGTLAIGILVMQDIFAVVFL
SVSTGKTPEITALALFALPLFRPLFFKLLDWAGHGEMLVLYGIFLALVAGAGTFELVGMKPDLGALILGMLLAGHSKASE
LSKSLFNLKEILLICFFLNIGLSAAPTLSGLTLALLLVLLLPVKGFLYFIIINKFKFRVRTSLLASLTLFNYSEFGLIVG
GLAFKMGWLPGDTLVAIAIAVSISFIISAPLNNFGHSIYQRSRHWLKEHTAEKLNSMDKLINPGRAQILILGMGSIGSGA
YDELKDKYGDIILGIELKDDAAKHHQELRRNVITGDATDPDFWERILSTSHVKLVLLAMPNHQGNQFALEQLKSRNYKGQ
TAAIAAYNDQIDGLVEQGVDAAFNIYNEAGNGFARHVTEQLNPKFNQ

Specific function: Unknown

COG id: COG4651

COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1786685, Length=533, Percent_Identity=24.765478424015, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786232, Length=534, Percent_Identity=25.6554307116105, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789749, Length=427, Percent_Identity=24.824355971897, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 57436; Mature: 57436

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLFIIAAFVMGFIALKINLPPLVGFLLAGFGLHAFGFQSNDTLSTFADLGVTLLLFSI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
GLKLDIKTLLAKEIWLGATLHNVFSTLFFTLALLGLKLLGITMLANIEIAQLVLFGFALS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
FSSTVFAVKALQEKGEMNATYGTLAIGILVMQDIFAVVFLSVSTGKTPEITALALFALPL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FRPLFFKLLDWAGHGEMLVLYGIFLALVAGAGTFELVGMKPDLGALILGMLLAGHSKASE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHH
LSKSLFNLKEILLICFFLNIGLSAAPTLSGLTLALLLVLLLPVKGFLYFIIINKFKFRVR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLLASLTLFNYSEFGLIVGGLAFKMGWLPGDTLVAIAIAVSISFIISAPLNNFGHSIYQ
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RSRHWLKEHTAEKLNSMDKLINPGRAQILILGMGSIGSGAYDELKDKYGDIILGIELKDD
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECHH
AAKHHQELRRNVITGDATDPDFWERILSTSHVKLVLLAMPNHQGNQFALEQLKSRNYKGQ
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCC
TAAIAAYNDQIDGLVEQGVDAAFNIYNEAGNGFARHVTEQLNPKFNQ
EEEEEEECHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELLFIIAAFVMGFIALKINLPPLVGFLLAGFGLHAFGFQSNDTLSTFADLGVTLLLFSI
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
GLKLDIKTLLAKEIWLGATLHNVFSTLFFTLALLGLKLLGITMLANIEIAQLVLFGFALS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
FSSTVFAVKALQEKGEMNATYGTLAIGILVMQDIFAVVFLSVSTGKTPEITALALFALPL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
FRPLFFKLLDWAGHGEMLVLYGIFLALVAGAGTFELVGMKPDLGALILGMLLAGHSKASE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHH
LSKSLFNLKEILLICFFLNIGLSAAPTLSGLTLALLLVLLLPVKGFLYFIIINKFKFRVR
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSLLASLTLFNYSEFGLIVGGLAFKMGWLPGDTLVAIAIAVSISFIISAPLNNFGHSIYQ
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RSRHWLKEHTAEKLNSMDKLINPGRAQILILGMGSIGSGAYDELKDKYGDIILGIELKDD
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHCCEEEEEEECHH
AAKHHQELRRNVITGDATDPDFWERILSTSHVKLVLLAMPNHQGNQFALEQLKSRNYKGQ
HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCC
TAAIAAYNDQIDGLVEQGVDAAFNIYNEAGNGFARHVTEQLNPKFNQ
EEEEEEECHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]