Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is abgT [H]

Identifier: 209694328

GI number: 209694328

Start: 824963

End: 826522

Strand: Direct

Name: abgT [H]

Synonym: VSAL_I0739

Alternate gene names: 209694328

Gene position: 824963-826522 (Clockwise)

Preceding gene: 209694327

Following gene: 209694335

Centisome position: 24.81

GC content: 41.15

Gene sequence:

>1560_bases
ATGAGTAACCAATCAACAGAGAAGGCACCAAAGCTTAGCGCTATGGACCGCTTTCTAAACACTATTGAACGAGTAGGTAA
TAAAATTCCAGATCCTGCTTTACTTTTTTTCTGGGGCCTTTTAATTGTTTGGGGGCTTTCAGCGCTATTATCACAGATTA
ACTTTGATCTAATTCATCCTGTAACCCAAGATGCGGTTCAGGTGAAAAACCTTTTAACGGGTGATTCTTTAGCGAACTTT
TTAGCAACAATGGTCACTAATTTTACTAGCTTTGCACCGCTAGGTATTGTACTGGTTGCAATGCTAGGTGTTGGTGTTGC
AGATTCTTCAGGCTTTATTCAAACTGGCCTAAAGAAAATGCTTAACTTCACTCCAGCTAAATTATTAACACCAATGCTTG
TTTTAGTTGCGATTGTGTCACACACAGCAGCGGATGCAGGTTATGTATTAGTTATCCCACTAGGTGGTATCATTTTCCAC
GCGGCGGGTCGTCATCCATTAGCGGGTATTGCCGCTGCATTTGCGGGTGTATCAGGTGGTTTTTCTGCCAACTTTATTCC
ATCAGGCATTGATCCATTATTGGCAGGCTTTACACAAACGGCCGCTCAAGTACTGGACCAATCGTATGTTGTTAATCCAT
TAGCGAATATTTTCTTTACTGGACTTTCTTCTGTACTGATTGTTGCTATTGGTTGGTATGTGACAGAGAAAATCATTGAA
CCACGCTTGGCAAATACGCCTGTAGATAAAGATGCAGAAGAAGCGCCAGATCTTGGTTCTTTTACTGAAATCGAATCAAA
AGCGTTTAAATATGCAGGCTGGGCTATGGTTGCTGGTATCGCATTATTAATTGCGCTTATCTATCCTGAAGGTTCAGCAC
TTCGTTCACCAGAAGGTGAAATTACGTCGTTCTCTGCGCCGCTAATGAAGTCTATTGTTCCATTGATTTTTATTCTGTTT
GTTATCCCTGGTATCGTTTTTGGACGTGTTTCTGGTAAATTTAAGAGCAGTAATGATGTAATTAAAGCAATGTCAGAAAC
AATGGGCACAATGGGTGCTTACATGGTTATGTCATTCTTCTGTGCGCAATTCTTAGTGGCATTTAGTCAATCAAACATCG
GTACTATTTTAGCGATGTACGGTGCTGATTTCTTGAAGGCGCTTGACCTTCCTGGGCAACTAACGATTGTTGGTATGATT
TTACTAACCGCTTTTGTTAATTTACTTATTGGTTCGGCCTCCGCTAAATGGGCACTAATTGGTCCGGTACTGGTTCCAAT
GCTAATGGGGGTTGGTATTTCACCTGAGCTGTCTCAAGCGGCATATCGTGTGGGTGATTCTGTATCAAACATTATTTCAC
CTCTGATGGTATTCTTCCCATTAGTTGTGGTTTATTGCCAACGTTATGTTAAGTCTACAGGTATCGGTACATTGGCTTCT
CTAATGATGCCTTTCTCTATTGCTATGCTAATTGGTTGGACAATCTTCTTACTAGCGTACTGGGCTCTAGGTATTCCTCT
AGGGATACAAGCACCATATACATACCAATTACCTGGTTAA

Upstream 100 bases:

>100_bases
ATATCTGGTTTACACTGATTTAGCAAAGGAATAGATAAAGAATAAAAAAAATCAAAGCTCTTTATCTTTAAATACAACAT
TTACTACTATGGAATTATGA

Downstream 100 bases:

>100_bases
TATAAGCACTTCGCTTTATGAAATAGCTTATAAAATAAAAGCCCTGAGAATGATAAGTTCTCAGGGCTTTTTTGTATGAC
GTTCTTTTCTTTTTTATTAT

Product: ion transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MSNQSTEKAPKLSAMDRFLNTIERVGNKIPDPALLFFWGLLIVWGLSALLSQINFDLIHPVTQDAVQVKNLLTGDSLANF
LATMVTNFTSFAPLGIVLVAMLGVGVADSSGFIQTGLKKMLNFTPAKLLTPMLVLVAIVSHTAADAGYVLVIPLGGIIFH
AAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAAQVLDQSYVVNPLANIFFTGLSSVLIVAIGWYVTEKIIE
PRLANTPVDKDAEEAPDLGSFTEIESKAFKYAGWAMVAGIALLIALIYPEGSALRSPEGEITSFSAPLMKSIVPLIFILF
VIPGIVFGRVSGKFKSSNDVIKAMSETMGTMGAYMVMSFFCAQFLVAFSQSNIGTILAMYGADFLKALDLPGQLTIVGMI
LLTAFVNLLIGSASAKWALIGPVLVPMLMGVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTLAS
LMMPFSIAMLIGWTIFLLAYWALGIPLGIQAPYTYQLPG

Sequences:

>Translated_519_residues
MSNQSTEKAPKLSAMDRFLNTIERVGNKIPDPALLFFWGLLIVWGLSALLSQINFDLIHPVTQDAVQVKNLLTGDSLANF
LATMVTNFTSFAPLGIVLVAMLGVGVADSSGFIQTGLKKMLNFTPAKLLTPMLVLVAIVSHTAADAGYVLVIPLGGIIFH
AAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAAQVLDQSYVVNPLANIFFTGLSSVLIVAIGWYVTEKIIE
PRLANTPVDKDAEEAPDLGSFTEIESKAFKYAGWAMVAGIALLIALIYPEGSALRSPEGEITSFSAPLMKSIVPLIFILF
VIPGIVFGRVSGKFKSSNDVIKAMSETMGTMGAYMVMSFFCAQFLVAFSQSNIGTILAMYGADFLKALDLPGQLTIVGMI
LLTAFVNLLIGSASAKWALIGPVLVPMLMGVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTLAS
LMMPFSIAMLIGWTIFLLAYWALGIPLGIQAPYTYQLPG
>Mature_518_residues
SNQSTEKAPKLSAMDRFLNTIERVGNKIPDPALLFFWGLLIVWGLSALLSQINFDLIHPVTQDAVQVKNLLTGDSLANFL
ATMVTNFTSFAPLGIVLVAMLGVGVADSSGFIQTGLKKMLNFTPAKLLTPMLVLVAIVSHTAADAGYVLVIPLGGIIFHA
AGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAAQVLDQSYVVNPLANIFFTGLSSVLIVAIGWYVTEKIIEP
RLANTPVDKDAEEAPDLGSFTEIESKAFKYAGWAMVAGIALLIALIYPEGSALRSPEGEITSFSAPLMKSIVPLIFILFV
IPGIVFGRVSGKFKSSNDVIKAMSETMGTMGAYMVMSFFCAQFLVAFSQSNIGTILAMYGADFLKALDLPGQLTIVGMIL
LTAFVNLLIGSASAKWALIGPVLVPMLMGVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTLASL
MMPFSIAMLIGWTIFLLAYWALGIPLGIQAPYTYQLPG

Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]

COG id: COG2978

COG function: function code H; Putative p-aminobenzoyl-glutamate transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081879, Length=487, Percent_Identity=34.7022587268994, Blast_Score=293, Evalue=2e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004697
- InterPro:   IPR011540 [H]

Pfam domain/function: PF03806 ABG_transport [H]

EC number: NA

Molecular weight: Translated: 55147; Mature: 55016

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
>Mature Secondary Structure 
SNQSTEKAPKLSAMDRFLNTIERVGNKIPDPALLFFWGLLIVWGLSALLSQINFDLIHP
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCH
VTQDAVQVKNLLTGDSLANFLATMVTNFTSFAPLGIVLVAMLGVGVADSSGFIQTGLKKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LNFTPAKLLTPMLVLVAIVSHTAADAGYVLVIPLGGIIFHAAGRHPLAGIAAAFAGVSGG
HCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHCCCC
FSANFIPSGIDPLLAGFTQTAAQVLDQSYVVNPLANIFFTGLSSVLIVAIGWYVTEKIIE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRLANTPVDKDAEEAPDLGSFTEIESKAFKYAGWAMVAGIALLIALIYPEGSALRSPEGE
CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
ITSFSAPLMKSIVPLIFILFVIPGIVFGRVSGKFKSSNDVIKAMSETMGTMGAYMVMSFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CAQFLVAFSQSNIGTILAMYGADFLKALDLPGQLTIVGMILLTAFVNLLIGSASAKWALI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GPVLVPMLMGVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTLAS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LMMPFSIAMLIGWTIFLLAYWALGIPLGIQAPYTYQLPG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]