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The map label for this gene is yeiE [H]

Identifier: 209694267

GI number: 209694267

Start: 755360

End: 756235

Strand: Reverse

Name: yeiE [H]

Synonym: VSAL_I0678

Alternate gene names: 209694267

Gene position: 756235-755360 (Counterclockwise)

Preceding gene: 209694272

Following gene: 209694265

Centisome position: 22.74

GC content: 37.79

Gene sequence:

>876_bases
ATGAGAATTTCACTAAAACAACTCAATGTATTTACGGCAATTGCTCAAGAAAAAACAATGACGAAAGCGGCTGAGCGACT
GTTTATTACAAAACCTGCGGTGAGCCTTTCATTGTCTGAACTTGAAAAGAATTTGGGTTACAAAGTATTTGATCGCGTAA
ATAATCGCTTAGTGTTAAATAGTGAAGGCCGCCAACTCCTTCCTTTAGCGGATGAATTACTAGAACGAGCTGAAGCTATC
GAGCATCAATTCACTGCTGATAGTCAGTTGACTGGTTCATTAAACATTGGTGCCAGTGATACGATTGGTAATCATATCGC
ACCAGTTTTACTGAGTAAATTCCAACAACAACACCCTTGTGATATTCAACAGTTATTTATTTCAAATACCGCTCAAATCA
TTAATCGACTGTTGGAATTCAAACTCGATATTGGCTTAGTTGAAGGGAAAGCACATCACCCCAAGCTAAACATGATTGAA
TGGCAACAGGATGACATGTACATAGTATGCGCCCCTTCTCACCCGTTAGCTATGCAGAACATAATTACATTAGAAGACTT
AGAACACTCAACTTGGTTATTAAGAGAAGAAGGATCTGGTAGCCGGGAGTATTTCCTTAATCATATTGCATCCAATTTAA
ATGATTGGCATGAGTCCTTACAGCTTCACACCACCGAAGCCATTATTAATTGCTGCTCTGAAAATATGGGGCTCGCATGT
TTATCTCAATTAGCCGCTCAAAATTCGATTAATGATGGACGGTTAGTTCAGCTTCCTTATGAAAAGAAATTGACTCGTCC
TTATTGGTTATTGGTTCATAAAGAAAAATATCAAACGCCATTATTGCAGTATTTTATGACTTTTATTCAACGTTAA

Upstream 100 bases:

>100_bases
GTTTACTACCAGACAACCATTAATAAAATTTGAATAAACTAAAGACTACGTTAAAATAAACTTAACGATGATGATCTATT
AGTATTTAGGACTTCCTGTC

Downstream 100 bases:

>100_bases
TGAGGCTATTTCTAGCCCCATAAAAATGATACCTAACGTTGGTGAGCAGGAAGATCGTGGTTTTCATAAGCGTCAGCAAA
CGAATGATTACGATCTCGAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRISLKQLNVFTAIAQEKTMTKAAERLFITKPAVSLSLSELEKNLGYKVFDRVNNRLVLNSEGRQLLPLADELLERAEAI
EHQFTADSQLTGSLNIGASDTIGNHIAPVLLSKFQQQHPCDIQQLFISNTAQIINRLLEFKLDIGLVEGKAHHPKLNMIE
WQQDDMYIVCAPSHPLAMQNIITLEDLEHSTWLLREEGSGSREYFLNHIASNLNDWHESLQLHTTEAIINCCSENMGLAC
LSQLAAQNSINDGRLVQLPYEKKLTRPYWLLVHKEKYQTPLLQYFMTFIQR

Sequences:

>Translated_291_residues
MRISLKQLNVFTAIAQEKTMTKAAERLFITKPAVSLSLSELEKNLGYKVFDRVNNRLVLNSEGRQLLPLADELLERAEAI
EHQFTADSQLTGSLNIGASDTIGNHIAPVLLSKFQQQHPCDIQQLFISNTAQIINRLLEFKLDIGLVEGKAHHPKLNMIE
WQQDDMYIVCAPSHPLAMQNIITLEDLEHSTWLLREEGSGSREYFLNHIASNLNDWHESLQLHTTEAIINCCSENMGLAC
LSQLAAQNSINDGRLVQLPYEKKLTRPYWLLVHKEKYQTPLLQYFMTFIQR
>Mature_291_residues
MRISLKQLNVFTAIAQEKTMTKAAERLFITKPAVSLSLSELEKNLGYKVFDRVNNRLVLNSEGRQLLPLADELLERAEAI
EHQFTADSQLTGSLNIGASDTIGNHIAPVLLSKFQQQHPCDIQQLFISNTAQIINRLLEFKLDIGLVEGKAHHPKLNMIE
WQQDDMYIVCAPSHPLAMQNIITLEDLEHSTWLLREEGSGSREYFLNHIASNLNDWHESLQLHTTEAIINCCSENMGLAC
LSQLAAQNSINDGRLVQLPYEKKLTRPYWLLVHKEKYQTPLLQYFMTFIQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=290, Percent_Identity=34.8275862068965, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1788748, Length=247, Percent_Identity=26.3157894736842, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787601, Length=301, Percent_Identity=24.5847176079734, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI87082132, Length=291, Percent_Identity=21.3058419243986, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787879, Length=302, Percent_Identity=27.1523178807947, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI157672245, Length=288, Percent_Identity=26.3888888888889, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788887, Length=289, Percent_Identity=24.2214532871972, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789173, Length=294, Percent_Identity=25.8503401360544, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786401, Length=292, Percent_Identity=23.2876712328767, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081904, Length=208, Percent_Identity=28.3653846153846, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789204, Length=275, Percent_Identity=21.8181818181818, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI145693105, Length=294, Percent_Identity=19.7278911564626, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790399, Length=273, Percent_Identity=20.5128205128205, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790208, Length=291, Percent_Identity=21.6494845360825, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787806, Length=168, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33265; Mature: 33265

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISLKQLNVFTAIAQEKTMTKAAERLFITKPAVSLSLSELEKNLGYKVFDRVNNRLVLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHCCCEEEEC
SEGRQLLPLADELLERAEAIEHQFTADSQLTGSLNIGASDTIGNHIAPVLLSKFQQQHPC
CCCCEECHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCC
DIQQLFISNTAQIINRLLEFKLDIGLVEGKAHHPKLNMIEWQQDDMYIVCAPSHPLAMQN
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCHHHHH
IITLEDLEHSTWLLREEGSGSREYFLNHIASNLNDWHESLQLHTTEAIINCCSENMGLAC
HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LSQLAAQNSINDGRLVQLPYEKKLTRPYWLLVHKEKYQTPLLQYFMTFIQR
HHHHHHHCCCCCCEEEECCHHHHCCCCEEEEEECCHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MRISLKQLNVFTAIAQEKTMTKAAERLFITKPAVSLSLSELEKNLGYKVFDRVNNRLVLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHHHHCCCEEEEC
SEGRQLLPLADELLERAEAIEHQFTADSQLTGSLNIGASDTIGNHIAPVLLSKFQQQHPC
CCCCEECHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCC
DIQQLFISNTAQIINRLLEFKLDIGLVEGKAHHPKLNMIEWQQDDMYIVCAPSHPLAMQN
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCEEEECCCCEEEEECCCCCHHHHH
IITLEDLEHSTWLLREEGSGSREYFLNHIASNLNDWHESLQLHTTEAIINCCSENMGLAC
HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LSQLAAQNSINDGRLVQLPYEKKLTRPYWLLVHKEKYQTPLLQYFMTFIQR
HHHHHHHCCCCCCEEEECCHHHHCCCCEEEEEECCHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]