Click here to switch to the map view.

The map label for this gene is yfiH [C]

Identifier: 209694255

GI number: 209694255

Start: 737376

End: 738110

Strand: Direct

Name: yfiH [C]

Synonym: VSAL_I0665

Alternate gene names: 209694255

Gene position: 737376-738110 (Clockwise)

Preceding gene: 209694254

Following gene: 209694256

Centisome position: 22.18

GC content: 38.23

Gene sequence:

>735_bases
ATGTCAATACTATCACCAAAGTGGTCAGCCCCTAAAAATATTAACGTAGTTAGTACTACTCGTGTTGGTGGTGTATCTAA
AGCACCATTTACGAGTTTTAATTTAGGTGATCATGTTGGTGATAACAGTAATGATGTTGTGCTAAATCGTGAAAAACTGA
TTACGTTGGCGCAGTTACCCACTGCGCCAACGTGGTTAAGCCAAATACATTCAACAATGGTTATTACCCTGCCTATTTCT
TCTGAAGAGATAAATTCTCCCTTGGTTGATGCCTCATATACGAATCAAGCAAATCAAGTATGTTGTGTAATGACAGCAGA
TTGCTTACCTGTTGTTATTTGTAATAGAGAAGGCACCGAAGTTGCTGCAGCTCATGCTGGATGGCGTGGTCTTCTTGATG
GTATTTTAGAAAATACAGTGAAGCATTTTTCTTCCAATGATCTTATTGCGTGGTGCGGACCAGCGATTGGACCTACTGCA
TTTGAAGTTGGTGATGAAGTTAAACAACTGTTCTGTGAGAAAGATCCTCAAGCTATAAACGCTTTTACTCCAAGCCATAA
CTCAAATAAATGGTTCGCGAATTTAAATTTACTGGCAACTCAGCGTTTACAGAGTGTTGGTGTTCAAGATATTTACTATT
CAAACTTTTGTACCTATTCAAATACAGATCAATTTTTCTCTTATAGAAAAGAAGGCTCGACAGGTCGTCAAGCTACCTTA
ATTTGGTTCGAATAA

Upstream 100 bases:

>100_bases
GTGAAGTCATGGAATTCCATGCGCCAATTCCTGACGATATTATTGCTCTAGCTCAAGCATTACGCGACGATGAGCGTTTA
TTGCATGAAGAAGAGTATTA

Downstream 100 bases:

>100_bases
TCCCTTTTATTGCCACTCCCATCAGTTGATTTCTAAAACAATAAACCCCATTTAATAAGTAATAGTTACTTGCTTTTCTC
TTTAGGAGAGGGTTATGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSILSPKWSAPKNINVVSTTRVGGVSKAPFTSFNLGDHVGDNSNDVVLNREKLITLAQLPTAPTWLSQIHSTMVITLPIS
SEEINSPLVDASYTNQANQVCCVMTADCLPVVICNREGTEVAAAHAGWRGLLDGILENTVKHFSSNDLIAWCGPAIGPTA
FEVGDEVKQLFCEKDPQAINAFTPSHNSNKWFANLNLLATQRLQSVGVQDIYYSNFCTYSNTDQFFSYRKEGSTGRQATL
IWFE

Sequences:

>Translated_244_residues
MSILSPKWSAPKNINVVSTTRVGGVSKAPFTSFNLGDHVGDNSNDVVLNREKLITLAQLPTAPTWLSQIHSTMVITLPIS
SEEINSPLVDASYTNQANQVCCVMTADCLPVVICNREGTEVAAAHAGWRGLLDGILENTVKHFSSNDLIAWCGPAIGPTA
FEVGDEVKQLFCEKDPQAINAFTPSHNSNKWFANLNLLATQRLQSVGVQDIYYSNFCTYSNTDQFFSYRKEGSTGRQATL
IWFE
>Mature_243_residues
SILSPKWSAPKNINVVSTTRVGGVSKAPFTSFNLGDHVGDNSNDVVLNREKLITLAQLPTAPTWLSQIHSTMVITLPISS
EEINSPLVDASYTNQANQVCCVMTADCLPVVICNREGTEVAAAHAGWRGLLDGILENTVKHFSSNDLIAWCGPAIGPTAF
EVGDEVKQLFCEKDPQAINAFTPSHNSNKWFANLNLLATQRLQSVGVQDIYYSNFCTYSNTDQFFSYRKEGSTGRQATLI
WFE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=225, Percent_Identity=27.1111111111111, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI190194372, Length=225, Percent_Identity=27.1111111111111, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1788945, Length=244, Percent_Identity=49.1803278688525, Blast_Score=249, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26764; Mature: 26633

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILSPKWSAPKNINVVSTTRVGGVSKAPFTSFNLGDHVGDNSNDVVLNREKLITLAQLP
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHEEEEECCC
TAPTWLSQIHSTMVITLPISSEEINSPLVDASYTNQANQVCCVMTADCLPVVICNREGTE
CCHHHHHHHCCEEEEEEECCHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCE
VAAAHAGWRGLLDGILENTVKHFSSNDLIAWCGPAIGPTAFEVGDEVKQLFCEKDPQAIN
EEHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
AFTPSHNSNKWFANLNLLATQRLQSVGVQDIYYSNFCTYSNTDQFFSYRKEGSTGRQATL
EECCCCCCCEEEEEEHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEE
IWFE
EEEC
>Mature Secondary Structure 
SILSPKWSAPKNINVVSTTRVGGVSKAPFTSFNLGDHVGDNSNDVVLNREKLITLAQLP
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHEEEEECCC
TAPTWLSQIHSTMVITLPISSEEINSPLVDASYTNQANQVCCVMTADCLPVVICNREGTE
CCHHHHHHHCCEEEEEEECCHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCE
VAAAHAGWRGLLDGILENTVKHFSSNDLIAWCGPAIGPTAFEVGDEVKQLFCEKDPQAIN
EEHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
AFTPSHNSNKWFANLNLLATQRLQSVGVQDIYYSNFCTYSNTDQFFSYRKEGSTGRQATL
EECCCCCCCEEEEEEHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEE
IWFE
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]