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The map label for this gene is recA [H]

Identifier: 209694225

GI number: 209694225

Start: 702343

End: 703386

Strand: Direct

Name: recA [H]

Synonym: VSAL_I0634

Alternate gene names: 209694225

Gene position: 702343-703386 (Clockwise)

Preceding gene: 209694224

Following gene: 209694226

Centisome position: 21.12

GC content: 39.66

Gene sequence:

>1044_bases
ATGGACGATAACAAGAAAAAAGCACTGGCCGCAGCATTAGGTCAAATTGAAAAACAATTTGGTAAAGGTTCAATCATGAA
GTTGGGCGATAACCGCACAATGGATGTTGAAACTGTGTCTACTGGTTCTTTATCTCTTGATATTGCCCTAGGTGCCGGTG
GTTTACCAATGGGACGTATCGTAGAAATTTACGGCCCTGAATCATCAGGTAAAACAACACTAACTTTAGAAGTGATTGCT
CAAGCACAAAAAGCAGGGAAAACCTGTGCATTTATTGATGCAGAGCACGCATTAGACCCTATTTACGCACAAAAACTTGG
TGTTGATATTGACCAATTGTTATGTTCTCAACCTGATACTGGTGAGCAAGCGTTAGAAATTGTTGATGCGTTAGCTCGTT
CTGGTGCGGTTGATCTAATTGTTGTTGATTCTGTGGCGGCTTTAACACCTAAAGCTGAAATTGAAGGCGAAATGGGCGAT
AGTCACATGGGTCTTCAAGCTCGTATGCTATCGCAAGCAATGCGTAAGTTAACGGGTAATTTAAAACAGTCGAACTGTAT
GTGTATCTTCATTAACCAAATTCGTATGAAAATTGGCGTAATGTTTGGTAACCCAGAAACAACAACTGGTGGTAATGCAT
TGAAGTTCTATGCTTCTGTTCGTCTTGATATTCGTCGTACTGGCGCAGTAAAAGATGGCGATGAAGTTGTTGGTAATGAG
ACTCGCATTAAAGTTGTTAAGAATAAAATTGCAGCGCCATTTAAACAAGCTGAAACTCAAATTCTATACGGTAAAGGTTT
TAACCGTGAAGGCGAACTGATTGATTTAGGTGTTAAACATAAATTAGTCGATAAAGCAGGCGCTTGGTATAGCTACAATG
GCGATAAGATCGGTCAAGGCAAAGCAAACGCATCTAAATTTATGCGCGAAAATCCAGAAATTGGCGCAGAGCTTGATAAG
AAATTACGTGAAATGCTATTAACTCCAACCGAAGATAAGCCAGAAGTTGTTGAGAAAATAGAAGAAGAAAACGAAGAGTT
TTAA

Upstream 100 bases:

>100_bases
AATTAAATAAAAAATGAATTAAAGCTATAGACACTGTATGAATAGACAGTATACTACTGGTCATTAACTGATTTAGTGAT
CTAGAATTCTGGAGAATCAA

Downstream 100 bases:

>100_bases
TTTTTCTGATTCTTATTGAAATGAAAGAAAGCCAAACCTTTGTGTTTGGCTTTTTTACGTCTATGAAAAGAGACGGCTTC
AATCAAAAATAGAATTATTT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MDDNKKKALAAALGQIEKQFGKGSIMKLGDNRTMDVETVSTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLEVIA
QAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLCSQPDTGEQALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKHKLVDKAGAWYSYNGDKIGQGKANASKFMRENPEIGAELDK
KLREMLLTPTEDKPEVVEKIEEENEEF

Sequences:

>Translated_347_residues
MDDNKKKALAAALGQIEKQFGKGSIMKLGDNRTMDVETVSTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLEVIA
QAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLCSQPDTGEQALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKHKLVDKAGAWYSYNGDKIGQGKANASKFMRENPEIGAELDK
KLREMLLTPTEDKPEVVEKIEEENEEF
>Mature_347_residues
MDDNKKKALAAALGQIEKQFGKGSIMKLGDNRTMDVETVSTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLEVIA
QAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLCSQPDTGEQALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKHKLVDKAGAWYSYNGDKIGQGKANASKFMRENPEIGAELDK
KLREMLLTPTEDKPEVVEKIEEENEEF

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=351, Percent_Identity=79.7720797720798, Blast_Score=577, Evalue=1e-166,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37583; Mature: 37583

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDNKKKALAAALGQIEKQFGKGSIMKLGDNRTMDVETVSTGSLSLDIALGAGGLPMGRI
CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCE
VEIYGPESSGKTTLTLEVIAQAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLCSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCCCHHHHHCCCCCC
GEQALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN
HHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKDGDEVVGNE
CCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCC
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKHKLVDKAGAWYSYNGDKIGQG
CEEEEHHHHHCCCHHHCCCEEEECCCCCCCCCEEEECCHHHHHHHCCCEEEECCCCCCCC
KANASKFMRENPEIGAELDKKLREMLLTPTEDKPEVVEKIEEENEEF
CHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MDDNKKKALAAALGQIEKQFGKGSIMKLGDNRTMDVETVSTGSLSLDIALGAGGLPMGRI
CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCE
VEIYGPESSGKTTLTLEVIAQAQKAGKTCAFIDAEHALDPIYAQKLGVDIDQLLCSQPDT
EEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHCCCHHHHHCCCCCC
GEQALEIVDALARSGAVDLIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGN
HHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
LKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAVKDGDEVVGNE
CCCCCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCCCCCCHHHCCCC
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKHKLVDKAGAWYSYNGDKIGQG
CEEEEHHHHHCCCHHHCCCEEEECCCCCCCCCEEEECCHHHHHHHCCCEEEECCCCCCCC
KANASKFMRENPEIGAELDKKLREMLLTPTEDKPEVVEKIEEENEEF
CHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA