| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694206
Identifier: 209694206
GI number: 209694206
Start: 676846
End: 676992
Strand: Direct
Name: 209694206
Synonym: VSAL_I0614
Alternate gene names: NA
Gene position: 676846-676992 (Clockwise)
Preceding gene: 209694205
Following gene: 209694207
Centisome position: 20.36
GC content: 36.05
Gene sequence:
>147_bases ATGGTGATTATGATTTGGAAGACAATAAAGCTGTGGGTTAAAAAATATGACGCTTGGTGCCTCTCGTTAGGGTTAACTCC AGAAAATAAACGCAGTTGTGTGCCTTATAAAAAAGAAGAGATAAGCAATGACAACAAAACTGATTGA
Upstream 100 bases:
>100_bases TAGAGCAACGCGTGAACACTAATTTATTAAAGTGAATATAATTAAACGGAGCCTATGTAGGCTCCGTTTTTGTATCTATA GTATTGCTGTTTAAAGGGAG
Downstream 100 bases:
>100_bases TTCGCACTGTCATTTTGATTTTCCGCCTTTTAAAGACAATGAGCTTTTTTATTTAGAAAAGGCACGCTCTGTTGGTGTGA AAAAACTGATCATTCCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MVIMIWKTIKLWVKKYDAWCLSLGLTPENKRSCVPYKKEEISNDNKTD
Sequences:
>Translated_48_residues MVIMIWKTIKLWVKKYDAWCLSLGLTPENKRSCVPYKKEEISNDNKTD >Mature_48_residues MVIMIWKTIKLWVKKYDAWCLSLGLTPENKRSCVPYKKEEISNDNKTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5718; Mature: 5718
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIMIWKTIKLWVKKYDAWCLSLGLTPENKRSCVPYKKEEISNDNKTD CEEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MVIMIWKTIKLWVKKYDAWCLSLGLTPENKRSCVPYKKEEISNDNKTD CEEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA