| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is rimI [H]
Identifier: 209694204
GI number: 209694204
Start: 674623
End: 675069
Strand: Direct
Name: rimI [H]
Synonym: VSAL_I0612
Alternate gene names: 209694204
Gene position: 674623-675069 (Clockwise)
Preceding gene: 209694203
Following gene: 209694205
Centisome position: 20.29
GC content: 38.26
Gene sequence:
>447_bases ATGACAATTAATATTCAATTGATAACCGAATCTCATTTAGATGATATTTGGCGTATTGAGCAAACTGCTCATTCACACTC TTGGGCTGAATCTATGATCCGCGATTTAGAAAGTCGCTGTGCTCAACACCGAGTGATGTTGGTCGAGGGAAAGGTCGTCG GGTATTTTTATGCTCAGAATGTCGTTGGAGAAGTCACATTACTTAATGTTGCTGTTGATCCTGCGTATCAAGGGAAAGGG TTTGGTCGTAAATTAACTGAATTTTTTATTGATATGTGCATGGAACAAAAAGCAGAGTCTGCATGGCTAGAAGTACGTAA AAGTAATGCAAAAGCCATTTCATTGTATGAATCTGAAGGCTTTAATGAAGTGACGCGTCGTCATGATTATTACCCAACAT CGAATGGTAAAGAAGACGCGATTATCATGAGTTATATATTCTTCTAA
Upstream 100 bases:
>100_bases ACTGAATTGGAAGGAGTTCAGATACTGAATTCTCCTCTTTTATCTGAAATGCATACAAATACTCAATTACGACGCGACCT ATGGCGACAAATTTGTTCTT
Downstream 100 bases:
>100_bases TGCCTATTATCTAATCGCGAAGGTTATTTTAATTCGATGCTTTAGATAATGAACGTCTTTGAGTATAATCTCGATTAATT ACATCCTTTCTGAAATCTTA
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTINIQLITESHLDDIWRIEQTAHSHSWAESMIRDLESRCAQHRVMLVEGKVVGYFYAQNVVGEVTLLNVAVDPAYQGKG FGRKLTEFFIDMCMEQKAESAWLEVRKSNAKAISLYESEGFNEVTRRHDYYPTSNGKEDAIIMSYIFF
Sequences:
>Translated_148_residues MTINIQLITESHLDDIWRIEQTAHSHSWAESMIRDLESRCAQHRVMLVEGKVVGYFYAQNVVGEVTLLNVAVDPAYQGKG FGRKLTEFFIDMCMEQKAESAWLEVRKSNAKAISLYESEGFNEVTRRHDYYPTSNGKEDAIIMSYIFF >Mature_147_residues TINIQLITESHLDDIWRIEQTAHSHSWAESMIRDLESRCAQHRVMLVEGKVVGYFYAQNVVGEVTLLNVAVDPAYQGKGF GRKLTEFFIDMCMEQKAESAWLEVRKSNAKAISLYESEGFNEVTRRHDYYPTSNGKEDAIIMSYIFF
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=140, Percent_Identity=43.5714285714286, Blast_Score=120, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 17094; Mature: 16962
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINIQLITESHLDDIWRIEQTAHSHSWAESMIRDLESRCAQHRVMLVEGKVVGYFYAQN CEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEEEHHHH VVGEVTLLNVAVDPAYQGKGFGRKLTEFFIDMCMEQKAESAWLEVRKSNAKAISLYESEG HHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC FNEVTRRHDYYPTSNGKEDAIIMSYIFF HHHHHHHCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure TINIQLITESHLDDIWRIEQTAHSHSWAESMIRDLESRCAQHRVMLVEGKVVGYFYAQN EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCEEEEEHHHH VVGEVTLLNVAVDPAYQGKGFGRKLTEFFIDMCMEQKAESAWLEVRKSNAKAISLYESEG HHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC FNEVTRRHDYYPTSNGKEDAIIMSYIFF HHHHHHHCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]