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The map label for this gene is yhbY [H]

Identifier: 209694182

GI number: 209694182

Start: 651666

End: 651962

Strand: Reverse

Name: yhbY [H]

Synonym: VSAL_I0590

Alternate gene names: 209694182

Gene position: 651962-651666 (Counterclockwise)

Preceding gene: 209694196

Following gene: 209694180

Centisome position: 19.61

GC content: 35.69

Gene sequence:

>297_bases
ATGAACCTAAGCACAAAACAAAAGCAACACCTTAAAGGCCTTGCTCACTATTTAAAACCCGTTGTAATGATGGGTTCAAA
TGGTCTAACTGAAGCAGTTGTAGCTGAAATTGAGATTGCACTTAATCATCACGAATTAATTAAAGTTAAAATCGCATCTG
AAGATCGTGATACTAAGCAATTGATTGTTGATGCAATCATTCGTGAAACAGAAGCAGAAAAAGTTCAAGTTATTGGTAAA
ACACTTGTGTTATACCGCGCTAGCGAAGCTCGTAAAATTGAGATCCCTAGAAAATAA

Upstream 100 bases:

>100_bases
TAATTTAAATTAGAAGACTGAAACAAAAAATAGTCTTCAGGGATAGATGGCGTTAGAATAGGCTGTTTTCAACCCTTAAT
ATAGAAAAAATCGGGTATAT

Downstream 100 bases:

>100_bases
TAACTTAGCATAAACAGTATATGCAAAGAAATTAAAAAGGCCGTCAATAGCTCATAGCTAGGCGGCCTTTTATTTTATAC
TAATATAAGCGCGATTAAAT

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNLSTKQKQHLKGLAHYLKPVVMMGSNGLTEAVVAEIEIALNHHELIKVKIASEDRDTKQLIVDAIIRETEAEKVQVIGK
TLVLYRASEARKIEIPRK

Sequences:

>Translated_98_residues
MNLSTKQKQHLKGLAHYLKPVVMMGSNGLTEAVVAEIEIALNHHELIKVKIASEDRDTKQLIVDAIIRETEAEKVQVIGK
TLVLYRASEARKIEIPRK
>Mature_98_residues
MNLSTKQKQHLKGLAHYLKPVVMMGSNGLTEAVVAEIEIALNHHELIKVKIASEDRDTKQLIVDAIIRETEAEKVQVIGK
TLVLYRASEARKIEIPRK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=78.3505154639175, Blast_Score=153, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 11040; Mature: 11040

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSTKQKQHLKGLAHYLKPVVMMGSNGLTEAVVAEIEIALNHHELIKVKIASEDRDTKQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCEEEEEEECCCCCHHHH
LIVDAIIRETEAEKVQVIGKTLVLYRASEARKIEIPRK
HHHHHHHHHCCHHHHHHHHHHHEEEECCCCEEECCCCC
>Mature Secondary Structure
MNLSTKQKQHLKGLAHYLKPVVMMGSNGLTEAVVAEIEIALNHHELIKVKIASEDRDTKQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCEEEEEEECCCCCHHHH
LIVDAIIRETEAEKVQVIGKTLVLYRASEARKIEIPRK
HHHHHHHHHCCHHHHHHHHHHHEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]