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The map label for this gene is yggV [C]

Identifier: 209694131

GI number: 209694131

Start: 594117

End: 594713

Strand: Reverse

Name: yggV [C]

Synonym: VSAL_I0538

Alternate gene names: 209694131

Gene position: 594713-594117 (Counterclockwise)

Preceding gene: 209694132

Following gene: 209694130

Centisome position: 17.89

GC content: 44.05

Gene sequence:

>597_bases
ATGAGCAAAATCGTATTAGCAACAGGCAACCAAGGTAAAGTTCGTGAAATGGCAGATGTTTTGTCTGACTTTGGATTTGA
TGTTGTGGCACAAAGTGAGTTCAACGTCTCTGACGTAGCAGAAACAGGCACAACCTTTATTGAGAATGCCATTATTAAAG
CGCGTCATGCGGCTAAAGAAAGCGGATTACCTGCGATTGCTGATGATTCCGGTTTAGAAGTCGACGCATTACATGGCGCA
CCAGGCGTTTACTCTGCACGCTACTCAGGCGAAGGCGCGACCGATCAAAAAAATATCGATAAAATGCTAGCAGCAATGAA
AGACATTCCAGAAGAAAAACGTACCGCCCGCTTCCATTGTGTCTTAGTCTTAATGAAGCATGAGAACGATCCTACGCCAT
TGATTTGTCACGGTTCATGGGAAGGCCACATTACCACGGAGCAACAAGGTGAAAATGGCTTTGGCTACGATCCTATTTTT
TGGGTAAGTGAAGACAATTGCTCTTCTGCAGAACTTGAACCAGCACGTAAAAAGCAACTGTCTCATCGTGGACAAGCTCT
GAAAAAACTGTTCGCTGCATTAAAAGAAGGTCAATAA

Upstream 100 bases:

>100_bases
GAAACCTTTCGCTTTGATATTGATGTATCTTCAGGAAAGAAAGGCGCTGGCAAATTAAAATTCAATCAAAAGTTCTACGT
AGAAGAGTAAGAGAATCATT

Downstream 100 bases:

>100_bases
TTGATGCTAGTCCCACCACCACTCAGTTTATACATTCATATTCCTTGGTGTATTCAAAAGTGCCCATATTGTGATTTCAA
CTCTCACGCGTTAAAAACAA

Product: deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSKIVLATGNQGKVREMADVLSDFGFDVVAQSEFNVSDVAETGTTFIENAIIKARHAAKESGLPAIADDSGLEVDALHGA
PGVYSARYSGEGATDQKNIDKMLAAMKDIPEEKRTARFHCVLVLMKHENDPTPLICHGSWEGHITTEQQGENGFGYDPIF
WVSEDNCSSAELEPARKKQLSHRGQALKKLFAALKEGQ

Sequences:

>Translated_198_residues
MSKIVLATGNQGKVREMADVLSDFGFDVVAQSEFNVSDVAETGTTFIENAIIKARHAAKESGLPAIADDSGLEVDALHGA
PGVYSARYSGEGATDQKNIDKMLAAMKDIPEEKRTARFHCVLVLMKHENDPTPLICHGSWEGHITTEQQGENGFGYDPIF
WVSEDNCSSAELEPARKKQLSHRGQALKKLFAALKEGQ
>Mature_197_residues
SKIVLATGNQGKVREMADVLSDFGFDVVAQSEFNVSDVAETGTTFIENAIIKARHAAKESGLPAIADDSGLEVDALHGAP
GVYSARYSGEGATDQKNIDKMLAAMKDIPEEKRTARFHCVLVLMKHENDPTPLICHGSWEGHITTEQQGENGFGYDPIFW
VSEDNCSSAELEPARKKQLSHRGQALKKLFAALKEGQ

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Escherichia coli, GI1789324, Length=197, Percent_Identity=64.9746192893401, Blast_Score=275, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 21546; Mature: 21415

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVLATGNQGKVREMADVLSDFGFDVVAQSEFNVSDVAETGTTFIENAIIKARHAAKE
CCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGLPAIADDSGLEVDALHGAPGVYSARYSGEGATDQKNIDKMLAAMKDIPEEKRTARFHC
CCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEE
VLVLMKHENDPTPLICHGSWEGHITTEQQGENGFGYDPIFWVSEDNCSSAELEPARKKQL
EEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
SHRGQALKKLFAALKEGQ
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKIVLATGNQGKVREMADVLSDFGFDVVAQSEFNVSDVAETGTTFIENAIIKARHAAKE
CEEEEEECCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGLPAIADDSGLEVDALHGAPGVYSARYSGEGATDQKNIDKMLAAMKDIPEEKRTARFHC
CCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHEEEE
VLVLMKHENDPTPLICHGSWEGHITTEQQGENGFGYDPIFWVSEDNCSSAELEPARKKQL
EEEEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
SHRGQALKKLFAALKEGQ
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]