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The map label for this gene is 209694045

Identifier: 209694045

GI number: 209694045

Start: 498845

End: 500602

Strand: Reverse

Name: 209694045

Synonym: VSAL_I0446

Alternate gene names: NA

Gene position: 500602-498845 (Counterclockwise)

Preceding gene: 209694046

Following gene: 209694043

Centisome position: 15.05

GC content: 35.95

Gene sequence:

>1758_bases
ATGGCAACCTTACTTACTCAGGGAACTCAACTCGAAGCAAGAAAAATAAAAAAACCACTTACTAAATCTTTTCTCGTTAG
CCTCAGTATTCTATTTTTTGTTTGTGCTCACTTTTTCCAACCAAATCCAGGTGGATCAGGTCTCCATTTAGCCTTTAATG
CTGCCTCTTGGATCCCTGCAAGTATTGCCATTGCCATTGCCTTCTATCATATAGCGAAACAAGGGCTAATTAAGTATTCA
ACATTAACAATCGTTTTGTTTTTCTCAGCAGTTCTACTTTCTGTACCTTTAATCTATCAAGACTCCTCTCCATTATTAGC
CGCTGGAAAATTTTTTGGATTATGGGCTGGCTGGCTTTTCTTTCTCACCTTACAACAATTTGCATTTTCTAATAAACAAA
AGCAATGGCTTCTATGGTGCATCATTGGTTCTGTATTGATTGAAGCTATTTTTGGCTATATTCAATATCTATTTCTAGAA
TCAGGGAATTCGTTTGGTTATAACGTAATTTCAAACCGCCCTTATGGTATTTTTCAGCAACCAAATGTAATGGCAAGCTT
TTTAGTTACCGGGCTTGCCATAGCCTCGTATTTTTTGGCAAGACAACCAATTAAATACCGAGAGAACCCTGTCGCCCTTA
CGCTTTTATATATAACAATAATCCTAACCTTACCGCTAATTATTGTTTTAGCTTCACGAACGGGTTGGATTGCTGCGGTA
TTTAGCCTTCTATTGTTAATCCCATACATGTGGAAATATTGCACAAAAAAACGATTTTCCTCGTGGGTTCTTGCTTTAAT
TATGGGCGTTAGTGGCAGTTTTGTTATCTTACATTTTTCACAAAATGATGATTTCAATAATATTTCATTATTAAGTAAAA
AAGCAGATTTAGAAAGTCCAAGAAGATACACATTCCCCCAAGCACTGGATATGTTTTTAGAGAAACCAATTACTGGCTAT
GGGAATTTTGAAGCCGCTTACATTCTTTATACGGCCAAACAGCACCAAATATCTGCCGATTATAAATCGGGATTACCATC
AATGGACCATCCTCATAATGAGGTCCTCTACTGGGGAGTAGAAGGCGGCATTCTTGCTATATTTGGATTATTATTAGCCG
CTGGTGGGGTGTTACTAAAAATTAGAAAAAGTAAATTAGATACACAATTTGCATTGCTTGCTCTAATCAGTCCTATCTTT
ATTCACAGCCAATTAGAATACCCTTTTTACCATTCTATGCTTCACTGGTTTACCTTCATTATCCTTCTCTTTTGGATAGA
CCAGCTTAGCTGTAAGTATAAAAAATACCGCATTACTGGAGTCAGCAAAATATCGTTACGAGTAAGTTCTCTTGTTCTTC
CTATTATCACTGCTTTTTATATGCTTTCAACATTACACACGAACTGGATTTTAACCAAATTTGAAACAACAAAACCAATG
AATCCAGAAATATTAAATCAAGTCAGTAATCCTGTCGTATGGGAAGATAGATTTAATTGGGATGTATTATCAGCACAATT
ATCCATTGGCGTCATCAATAAAAGACCCGATTTAATCATACCTTACATTACTTGGTCCAAAGAGCTTATAAAAAATAAAC
CTAGACCAGCATTTTATCAAAACCTAATCATCGCTTATCAAGCTTTAGAGCAAGAAGCAAACGCGGAAGACATAAGAAGA
GAAGCCGTATTCTTATTTCCGAATAACAATTTCGAAACCGTTCAACTTGACCAAAAGTTACGTCAAATCAGAAAGTAA

Upstream 100 bases:

>100_bases
AAACCAATGCTTTCCTTATAAAATTCCATACTTATTAAGTATTATCGGATAGAATAAAGCCAGCACTTTGCTGGCTTTAT
TACAGGGATTAATTGAAAAA

Downstream 100 bases:

>100_bases
TGATAAAACGCCGTTGAATTTATCAACGGCGTTTTATCATCATGTTATTTATAATACGTCAGATAACGCTTTTAAACAAA
GAGACACGTTTTCTTTACGT

Product: O-antigen polymerase

Products: NA

Alternate protein names: Lipid A Core; O-Antigen Polymerase Family; Inner Membrane Protein

Number of amino acids: Translated: 585; Mature: 584

Protein sequence:

>585_residues
MATLLTQGTQLEARKIKKPLTKSFLVSLSILFFVCAHFFQPNPGGSGLHLAFNAASWIPASIAIAIAFYHIAKQGLIKYS
TLTIVLFFSAVLLSVPLIYQDSSPLLAAGKFFGLWAGWLFFLTLQQFAFSNKQKQWLLWCIIGSVLIEAIFGYIQYLFLE
SGNSFGYNVISNRPYGIFQQPNVMASFLVTGLAIASYFLARQPIKYRENPVALTLLYITIILTLPLIIVLASRTGWIAAV
FSLLLLIPYMWKYCTKKRFSSWVLALIMGVSGSFVILHFSQNDDFNNISLLSKKADLESPRRYTFPQALDMFLEKPITGY
GNFEAAYILYTAKQHQISADYKSGLPSMDHPHNEVLYWGVEGGILAIFGLLLAAGGVLLKIRKSKLDTQFALLALISPIF
IHSQLEYPFYHSMLHWFTFIILLFWIDQLSCKYKKYRITGVSKISLRVSSLVLPIITAFYMLSTLHTNWILTKFETTKPM
NPEILNQVSNPVVWEDRFNWDVLSAQLSIGVINKRPDLIIPYITWSKELIKNKPRPAFYQNLIIAYQALEQEANAEDIRR
EAVFLFPNNNFETVQLDQKLRQIRK

Sequences:

>Translated_585_residues
MATLLTQGTQLEARKIKKPLTKSFLVSLSILFFVCAHFFQPNPGGSGLHLAFNAASWIPASIAIAIAFYHIAKQGLIKYS
TLTIVLFFSAVLLSVPLIYQDSSPLLAAGKFFGLWAGWLFFLTLQQFAFSNKQKQWLLWCIIGSVLIEAIFGYIQYLFLE
SGNSFGYNVISNRPYGIFQQPNVMASFLVTGLAIASYFLARQPIKYRENPVALTLLYITIILTLPLIIVLASRTGWIAAV
FSLLLLIPYMWKYCTKKRFSSWVLALIMGVSGSFVILHFSQNDDFNNISLLSKKADLESPRRYTFPQALDMFLEKPITGY
GNFEAAYILYTAKQHQISADYKSGLPSMDHPHNEVLYWGVEGGILAIFGLLLAAGGVLLKIRKSKLDTQFALLALISPIF
IHSQLEYPFYHSMLHWFTFIILLFWIDQLSCKYKKYRITGVSKISLRVSSLVLPIITAFYMLSTLHTNWILTKFETTKPM
NPEILNQVSNPVVWEDRFNWDVLSAQLSIGVINKRPDLIIPYITWSKELIKNKPRPAFYQNLIIAYQALEQEANAEDIRR
EAVFLFPNNNFETVQLDQKLRQIRK
>Mature_584_residues
ATLLTQGTQLEARKIKKPLTKSFLVSLSILFFVCAHFFQPNPGGSGLHLAFNAASWIPASIAIAIAFYHIAKQGLIKYST
LTIVLFFSAVLLSVPLIYQDSSPLLAAGKFFGLWAGWLFFLTLQQFAFSNKQKQWLLWCIIGSVLIEAIFGYIQYLFLES
GNSFGYNVISNRPYGIFQQPNVMASFLVTGLAIASYFLARQPIKYRENPVALTLLYITIILTLPLIIVLASRTGWIAAVF
SLLLLIPYMWKYCTKKRFSSWVLALIMGVSGSFVILHFSQNDDFNNISLLSKKADLESPRRYTFPQALDMFLEKPITGYG
NFEAAYILYTAKQHQISADYKSGLPSMDHPHNEVLYWGVEGGILAIFGLLLAAGGVLLKIRKSKLDTQFALLALISPIFI
HSQLEYPFYHSMLHWFTFIILLFWIDQLSCKYKKYRITGVSKISLRVSSLVLPIITAFYMLSTLHTNWILTKFETTKPMN
PEILNQVSNPVVWEDRFNWDVLSAQLSIGVINKRPDLIIPYITWSKELIKNKPRPAFYQNLIIAYQALEQEANAEDIRRE
AVFLFPNNNFETVQLDQKLRQIRK

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66699; Mature: 66568

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLLTQGTQLEARKIKKPLTKSFLVSLSILFFVCAHFFQPNPGGSGLHLAFNAASWIPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHH
SIAIAIAFYHIAKQGLIKYSTLTIVLFFSAVLLSVPLIYQDSSPLLAAGKFFGLWAGWLF
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHH
FLTLQQFAFSNKQKQWLLWCIIGSVLIEAIFGYIQYLFLESGNSFGYNVISNRPYGIFQQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC
PNVMASFLVTGLAIASYFLARQPIKYRENPVALTLLYITIILTLPLIIVLASRTGWIAAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FSLLLLIPYMWKYCTKKRFSSWVLALIMGVSGSFVILHFSQNDDFNNISLLSKKADLESP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCC
RRYTFPQALDMFLEKPITGYGNFEAAYILYTAKQHQISADYKSGLPSMDHPHNEVLYWGV
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHCCCHHHCCCCCCCCCCCCEEEEEC
EGGILAIFGLLLAAGGVLLKIRKSKLDTQFALLALISPIFIHSQLEYPFYHSMLHWFTFI
CCCHHHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ILLFWIDQLSCKYKKYRITGVSKISLRVSSLVLPIITAFYMLSTLHTNWILTKFETTKPM
HHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
NPEILNQVSNPVVWEDRFNWDVLSAQLSIGVINKRPDLIIPYITWSKELIKNKPRPAFYQ
CHHHHHHCCCCEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCHHHHCCCCCCHHHH
NLIIAYQALEQEANAEDIRREAVFLFPNNNFETVQLDQKLRQIRK
HHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCEEEHHHHHHHHCC
>Mature Secondary Structure 
ATLLTQGTQLEARKIKKPLTKSFLVSLSILFFVCAHFFQPNPGGSGLHLAFNAASWIPA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHH
SIAIAIAFYHIAKQGLIKYSTLTIVLFFSAVLLSVPLIYQDSSPLLAAGKFFGLWAGWLF
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHHHHH
FLTLQQFAFSNKQKQWLLWCIIGSVLIEAIFGYIQYLFLESGNSFGYNVISNRPYGIFQQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC
PNVMASFLVTGLAIASYFLARQPIKYRENPVALTLLYITIILTLPLIIVLASRTGWIAAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FSLLLLIPYMWKYCTKKRFSSWVLALIMGVSGSFVILHFSQNDDFNNISLLSKKADLESP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHCCCCCCCCC
RRYTFPQALDMFLEKPITGYGNFEAAYILYTAKQHQISADYKSGLPSMDHPHNEVLYWGV
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECHHHCCCHHHCCCCCCCCCCCCEEEEEC
EGGILAIFGLLLAAGGVLLKIRKSKLDTQFALLALISPIFIHSQLEYPFYHSMLHWFTFI
CCCHHHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ILLFWIDQLSCKYKKYRITGVSKISLRVSSLVLPIITAFYMLSTLHTNWILTKFETTKPM
HHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
NPEILNQVSNPVVWEDRFNWDVLSAQLSIGVINKRPDLIIPYITWSKELIKNKPRPAFYQ
CHHHHHHCCCCEEECCCCCCEEEEEEEEEEEECCCCCEEEEEEECCHHHHCCCCCCHHHH
NLIIAYQALEQEANAEDIRREAVFLFPNNNFETVQLDQKLRQIRK
HHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA