| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ytfK [H]
Identifier: 209694032
GI number: 209694032
Start: 466791
End: 467000
Strand: Direct
Name: ytfK [H]
Synonym: VSAL_I0431
Alternate gene names: 209694032
Gene position: 466791-467000 (Clockwise)
Preceding gene: 209694024
Following gene: 209694034
Centisome position: 14.04
GC content: 35.71
Gene sequence:
>210_bases ATGTTTAGAAATTTTAAGGCTTATAGACCACTGCAAGTGGCACGTTTTGTAAAGACTCTCTTTAAAGGGCAAATTCATAT TGAAGGCGTAGGCACTTTTGATTTTGATGAAGGAAAAATATTAATGCCATCTTTAGAGAATAAAAGAATGTTGTCTGTTA TGAGTGAGGTAAACCAACATATTCGCCAGCTTTCTCTGATGCCTGCATAG
Upstream 100 bases:
>100_bases ATGTTTCGATAACATTACTTTAGATAATATACGCCTGAATGACGGTTGTGTATTTTGATGGACTAAAATGAAACCTTGTA CGGATTATTGAGGTATGGCT
Downstream 100 bases:
>100_bases TAGCGTAATAAAATTATTAATAAAAAAGGTGCTCAATAATGGGCACCTTTTTTATGCTATAAAAAGAATTAAAGAAAACA CACGCCAGTTCCGCTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MFRNFKAYRPLQVARFVKTLFKGQIHIEGVGTFDFDEGKILMPSLENKRMLSVMSEVNQHIRQLSLMPA
Sequences:
>Translated_69_residues MFRNFKAYRPLQVARFVKTLFKGQIHIEGVGTFDFDEGKILMPSLENKRMLSVMSEVNQHIRQLSLMPA >Mature_69_residues MFRNFKAYRPLQVARFVKTLFKGQIHIEGVGTFDFDEGKILMPSLENKRMLSVMSEVNQHIRQLSLMPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082392, Length=61, Percent_Identity=54.0983606557377, Blast_Score=76, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009491 - ProDom: PD055267 [H]
Pfam domain/function: PF06526 DUF1107 [H]
EC number: NA
Molecular weight: Translated: 8042; Mature: 8042
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRNFKAYRPLQVARFVKTLFKGQIHIEGVGTFDFDEGKILMPSLENKRMLSVMSEVNQH CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCEECCCCEEECCCCCCHHHHHHHHHHHHH IRQLSLMPA HHHHHCCCC >Mature Secondary Structure MFRNFKAYRPLQVARFVKTLFKGQIHIEGVGTFDFDEGKILMPSLENKRMLSVMSEVNQH CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCEECCCCEEECCCCCCHHHHHHHHHHHHH IRQLSLMPA HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]