Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694019

Identifier: 209694019

GI number: 209694019

Start: 453631

End: 454044

Strand: Direct

Name: 209694019

Synonym: VSAL_I0418

Alternate gene names: NA

Gene position: 453631-454044 (Clockwise)

Preceding gene: 209694008

Following gene: 209694021

Centisome position: 13.64

GC content: 33.33

Gene sequence:

>414_bases
ATGAATAAAAGATTTTGGTTACACCTTGGCACGGCGATTGGGCTGTTTGGGTTTTTCTTTATTGCGGCTTTTGTTTTTCA
TATTTATGAAGTTTTTTACTTCTTTTCATTTTTGGCTTACGGCGTTTTAATTTTTAATCTATTAAGTGCCATTGTCTATG
CGGATCAATGGTTTCATTATGTTCTTTGCAGTGTGCTATTAATTATTTTAGGGACGTTTGCATCGATAGATGTCTTATCC
GCAAGGGATGAATTACTAACAAATTGGATAGAGGCGGAGTGGTTAGGGTTAACGGTCAAAAACAGTGATGATTACATTCA
AGTTATTTTAATTCTAATTAATATTTTTACGGGAAGCTTGGCTGCCAATACGCTATTTTATGGATTATGTAAAAAAAATA
GCACCGTTAAATAA

Upstream 100 bases:

>100_bases
TAGAGTGGCACTCTATTAAAAAAATGTAAATATATGTTTCTCATTTGTTTTAATTTGAGCTTATGATTAACAATAGGTTC
CGTTTATATTTGGTTTATGT

Downstream 100 bases:

>100_bases
CGATGCTATCTTATGTAATCAGAGTAAATCAGTATTGAATTATTTACTTAGATTAATGTTATAAACGGCAAAACCAACAT
CGTCTGTCGCGACTTGTTTC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNKRFWLHLGTAIGLFGFFFIAAFVFHIYEVFYFFSFLAYGVLIFNLLSAIVYADQWFHYVLCSVLLIILGTFASIDVLS
ARDELLTNWIEAEWLGLTVKNSDDYIQVILILINIFTGSLAANTLFYGLCKKNSTVK

Sequences:

>Translated_137_residues
MNKRFWLHLGTAIGLFGFFFIAAFVFHIYEVFYFFSFLAYGVLIFNLLSAIVYADQWFHYVLCSVLLIILGTFASIDVLS
ARDELLTNWIEAEWLGLTVKNSDDYIQVILILINIFTGSLAANTLFYGLCKKNSTVK
>Mature_137_residues
MNKRFWLHLGTAIGLFGFFFIAAFVFHIYEVFYFFSFLAYGVLIFNLLSAIVYADQWFHYVLCSVLLIILGTFASIDVLS
ARDELLTNWIEAEWLGLTVKNSDDYIQVILILINIFTGSLAANTLFYGLCKKNSTVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15704; Mature: 15704

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRFWLHLGTAIGLFGFFFIAAFVFHIYEVFYFFSFLAYGVLIFNLLSAIVYADQWFHY
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLCSVLLIILGTFASIDVLSARDELLTNWIEAEWLGLTVKNSDDYIQVILILINIFTGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHH
AANTLFYGLCKKNSTVK
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKRFWLHLGTAIGLFGFFFIAAFVFHIYEVFYFFSFLAYGVLIFNLLSAIVYADQWFHY
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLCSVLLIILGTFASIDVLSARDELLTNWIEAEWLGLTVKNSDDYIQVILILINIFTGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHH
AANTLFYGLCKKNSTVK
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA