Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
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Accession | NC_011312 |
Length | 3,325,165 |
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The map label for this gene is 209693988
Identifier: 209693988
GI number: 209693988
Start: 426981
End: 427475
Strand: Reverse
Name: 209693988
Synonym: VSAL_I0386
Alternate gene names: NA
Gene position: 427475-426981 (Counterclockwise)
Preceding gene: 209693989
Following gene: 209693983
Centisome position: 12.86
GC content: 40.0
Gene sequence:
>495_bases ATGCGCGCTGAATTTGTAAACCCTTTCTTAGCTTCACTGATGAATGTACTTAAAACGATGGCTTCGATGGAGTTAAAACC TCAAAAACCTCGTATTAAAAAAGACGAAATTGCTCGTGGTGATGTATCAGGCTTAATCGGCATGGTTGCTTCTCAAAGCC GTGGTTCGATGTCTATCACTTTTGAAGAATCTCTTGCACTTCAAATCATGCAAAATATGCTCGGCGAACGTCCAAACAGC ATTAATGAAGAAGTAACGGATATGGTCGGTGAAATCACAAACATGGTCACCGGTGGTGCAAAACGAATTCTTTCAGAAAG TGGGTTTGAATTTGATATGGCCATTCCAATGGTTGTTTCAGGCAGAGCACACACGATTACTCATAAATGTGAAGGCGCCA TTATTATTATGCCGTTTACGTCTGAATGGGGTAATGCATTTATTGAGATTTGTTTCGAGAATAGAGACGAACTCAAAAAA GAAAGGTTGATGTAG
Upstream 100 bases:
>100_bases TTGAATTTTCTGTTGAAAACCATATTGTTGAAACTCATGGTACCTGCAAAGCTTGTTTACATAGCGATAATCAAAATTAA TTTAAAGGATCCAACTCACG
Downstream 100 bases:
>100_bases TAATACATCAACCTTTTTTATTATCTGTATAAAATCAGCACATATAAAAAGAGCCAACCGAAGTCAGCTCTTTCATATTA TCGAGTGCAATTCAATTATG
Product: chemotaxis protein
Products: NA
Alternate protein names: CheC Domain Protein; CheC Domain-Containing Protein; CheC-Like Protein; Inhibitor Of MCP Methylation; Chemotaxis Protein Phosphatase CheX; Inhibitor Of MCP Methylation CheC-Like Protein; CheC-Like Family Protein; Chec Domain Protein; Inhibitor Of MCP Methylation CheC N; Chemotaxis Protein; Inhibitor Of MCP Methylation CheC-Like
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRAEFVNPFLASLMNVLKTMASMELKPQKPRIKKDEIARGDVSGLIGMVASQSRGSMSITFEESLALQIMQNMLGERPNS INEEVTDMVGEITNMVTGGAKRILSESGFEFDMAIPMVVSGRAHTITHKCEGAIIIMPFTSEWGNAFIEICFENRDELKK ERLM
Sequences:
>Translated_164_residues MRAEFVNPFLASLMNVLKTMASMELKPQKPRIKKDEIARGDVSGLIGMVASQSRGSMSITFEESLALQIMQNMLGERPNS INEEVTDMVGEITNMVTGGAKRILSESGFEFDMAIPMVVSGRAHTITHKCEGAIIIMPFTSEWGNAFIEICFENRDELKK ERLM >Mature_164_residues MRAEFVNPFLASLMNVLKTMASMELKPQKPRIKKDEIARGDVSGLIGMVASQSRGSMSITFEESLALQIMQNMLGERPNS INEEVTDMVGEITNMVTGGAKRILSESGFEFDMAIPMVVSGRAHTITHKCEGAIIIMPFTSEWGNAFIEICFENRDELKK ERLM
Specific function: Unknown
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18279; Mature: 18279
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAEFVNPFLASLMNVLKTMASMELKPQKPRIKKDEIARGDVSGLIGMVASQSRGSMSIT CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCEEEE FEESLALQIMQNMLGERPNSINEEVTDMVGEITNMVTGGAKRILSESGFEFDMAIPMVVS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEC GRAHTITHKCEGAIIIMPFTSEWGNAFIEICFENRDELKKERLM CCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MRAEFVNPFLASLMNVLKTMASMELKPQKPRIKKDEIARGDVSGLIGMVASQSRGSMSIT CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCEEEE FEESLALQIMQNMLGERPNSINEEVTDMVGEITNMVTGGAKRILSESGFEFDMAIPMVVS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEC GRAHTITHKCEGAIIIMPFTSEWGNAFIEICFENRDELKKERLM CCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA