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The map label for this gene is rdoA [H]

Identifier: 209693675

GI number: 209693675

Start: 48066

End: 49049

Strand: Reverse

Name: rdoA [H]

Synonym: VSAL_I0045

Alternate gene names: 209693675

Gene position: 49049-48066 (Counterclockwise)

Preceding gene: 209693676

Following gene: 209693674

Centisome position: 1.48

GC content: 41.87

Gene sequence:

>984_bases
ATGTCTGAACACGCTTTTAATTTCAGTACACTTACTCCTGATTTATTGTGGTATGCCCTCGCAGATATTGGCGTAAGAGC
TGAATCAGGATTCCTCGCCTTAAACAGTTATGAGAATCGCGTTTATCAATTTAGCGATGAACACAAGCGTCGGTTCGTTG
TGAAATTTTATCGACCTCAACGCTGGTCAGAAGCCCAAATATTAGAAGAACACTTATTTGCGAAGCAACTTGTACAACAA
GACATTCCCGTTGCTGCGCCGTTAGAAATAAATGGCAAAACACTTCATTTCGCTAAAGGTTATTGGTTTGCTCTTTTTGA
TAGCCTAGGCGGGCGCACCTTTGAAGTGGATAATTTTGATCAGCTTGAATGGGTAGGGCGATTTTTAGGCCGAATTCATA
AAGTAGGTGAAGCGGAGCTATTTACTCATCGTCCAACGGTAGGCTTAGATGAGTACCTCTATCAACCACGAAAGCTGTTA
GAGAATAGTTCATTCATTCCCTCTTATTTAGAAAACAGCTTCTTCTCCGATCTCGACCTGTTAATTAGTCGAATTGAACA
ACATTGGCAACCAAGTAAAGCGATTCGCCTACATGGTGACTGCCACCCAAGCAATATTTTATGGCGTGATGGTCCATTGT
TCGTCGATTTGGACGACGCAAGAAATGGTCCTGCAGCACAAGATATGTGGATGCTGCTTAATGGCGATCGCCAAGATAAG
TTAGTTCAGTTAGATATTCTCGTTGAAGCTTATTCTGAATATTGCGATTTTGACCATAACCAATTGAAACTAATTGAGCC
TTTGCGTGGTCTACGAATGGTACACTACATGGCATGGCTAGCAAAACGTTGGCAAGATCCCGCGTTTCCTATTGCTTTCC
CATGGTTTTCAGATGCAAAATATTGGGAAAGTCAGGTACTTGGTTTTAAAGAGCAAATAGCAGCGTTAAACGAAGCACCT
TTAGAGTTGATGCCTCAATGGTAA

Upstream 100 bases:

>100_bases
CAAGTGATAAAAACAGAAAGCCGTTTCTTTAAACCGCTATAATCACTCTATTATTGACTCAAAGGGCTCATGATGAGCCC
TTTTTATTTGAGAGCACCCT

Downstream 100 bases:

>100_bases
TAAAAATACAATAAAACAAACACAAATGGATTGGAGAAAGTTAAACATGATGAAAACAATGATGGCACTGTTTGGTGCTT
TAGTTCTTAGTTTTTCAGTG

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSEHAFNFSTLTPDLLWYALADIGVRAESGFLALNSYENRVYQFSDEHKRRFVVKFYRPQRWSEAQILEEHLFAKQLVQQ
DIPVAAPLEINGKTLHFAKGYWFALFDSLGGRTFEVDNFDQLEWVGRFLGRIHKVGEAELFTHRPTVGLDEYLYQPRKLL
ENSSFIPSYLENSFFSDLDLLISRIEQHWQPSKAIRLHGDCHPSNILWRDGPLFVDLDDARNGPAAQDMWMLLNGDRQDK
LVQLDILVEAYSEYCDFDHNQLKLIEPLRGLRMVHYMAWLAKRWQDPAFPIAFPWFSDAKYWESQVLGFKEQIAALNEAP
LELMPQW

Sequences:

>Translated_327_residues
MSEHAFNFSTLTPDLLWYALADIGVRAESGFLALNSYENRVYQFSDEHKRRFVVKFYRPQRWSEAQILEEHLFAKQLVQQ
DIPVAAPLEINGKTLHFAKGYWFALFDSLGGRTFEVDNFDQLEWVGRFLGRIHKVGEAELFTHRPTVGLDEYLYQPRKLL
ENSSFIPSYLENSFFSDLDLLISRIEQHWQPSKAIRLHGDCHPSNILWRDGPLFVDLDDARNGPAAQDMWMLLNGDRQDK
LVQLDILVEAYSEYCDFDHNQLKLIEPLRGLRMVHYMAWLAKRWQDPAFPIAFPWFSDAKYWESQVLGFKEQIAALNEAP
LELMPQW
>Mature_326_residues
SEHAFNFSTLTPDLLWYALADIGVRAESGFLALNSYENRVYQFSDEHKRRFVVKFYRPQRWSEAQILEEHLFAKQLVQQD
IPVAAPLEINGKTLHFAKGYWFALFDSLGGRTFEVDNFDQLEWVGRFLGRIHKVGEAELFTHRPTVGLDEYLYQPRKLLE
NSSFIPSYLENSFFSDLDLLISRIEQHWQPSKAIRLHGDCHPSNILWRDGPLFVDLDDARNGPAAQDMWMLLNGDRQDKL
VQLDILVEAYSEYCDFDHNQLKLIEPLRGLRMVHYMAWLAKRWQDPAFPIAFPWFSDAKYWESQVLGFKEQIAALNEAPL
ELMPQW

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=56.7073170731707, Blast_Score=407, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38363; Mature: 38232

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHAFNFSTLTPDLLWYALADIGVRAESGFLALNSYENRVYQFSDEHKRRFVVKFYRPQ
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHEECCCHHHHEEEEEEECCC
RWSEAQILEEHLFAKQLVQQDIPVAAPLEINGKTLHFAKGYWFALFDSLGGRTFEVDNFD
CCCHHHHHHHHHHHHHHHHHCCCEECCEEECCCEEEEECCHHHHHHHHCCCCEEECCCCH
QLEWVGRFLGRIHKVGEAELFTHRPTVGLDEYLYQPRKLLENSSFIPSYLENSFFSDLDL
HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LISRIEQHWQPSKAIRLHGDCHPSNILWRDGPLFVDLDDARNGPAAQDMWMLLNGDRQDK
HHHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEEECCCCCCCCHHHEEEEECCCCCCC
LVQLDILVEAYSEYCDFDHNQLKLIEPLRGLRMVHYMAWLAKRWQDPAFPIAFPWFSDAK
EEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHH
YWESQVLGFKEQIAALNEAPLELMPQW
HHHHHHHHHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure 
SEHAFNFSTLTPDLLWYALADIGVRAESGFLALNSYENRVYQFSDEHKRRFVVKFYRPQ
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHEECCCHHHHEEEEEEECCC
RWSEAQILEEHLFAKQLVQQDIPVAAPLEINGKTLHFAKGYWFALFDSLGGRTFEVDNFD
CCCHHHHHHHHHHHHHHHHHCCCEECCEEECCCEEEEECCHHHHHHHHCCCCEEECCCCH
QLEWVGRFLGRIHKVGEAELFTHRPTVGLDEYLYQPRKLLENSSFIPSYLENSFFSDLDL
HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LISRIEQHWQPSKAIRLHGDCHPSNILWRDGPLFVDLDDARNGPAAQDMWMLLNGDRQDK
HHHHHHHHCCCCCEEEEECCCCCCCEEECCCCEEEEECCCCCCCCHHHEEEEECCCCCCC
LVQLDILVEAYSEYCDFDHNQLKLIEPLRGLRMVHYMAWLAKRWQDPAFPIAFPWFSDAK
EEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHH
YWESQVLGFKEQIAALNEAPLELMPQW
HHHHHHHHHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]