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The map label for this gene is dsbA [H]

Identifier: 209693674

GI number: 209693674

Start: 47417

End: 48040

Strand: Reverse

Name: dsbA [H]

Synonym: VSAL_I0044

Alternate gene names: 209693674

Gene position: 48040-47417 (Counterclockwise)

Preceding gene: 209693675

Following gene: 209693668

Centisome position: 1.44

GC content: 37.18

Gene sequence:

>624_bases
ATGGATTGGAGAAAGTTAAACATGATGAAAACAATGATGGCACTGTTTGGTGCTTTAGTTCTTAGTTTTTCAGTGAATGC
AGCAAACTTCACTGAAGGCGATTATTACAAGGTTCTTAACCTTCCAGAATCAAAAACACCGACAGTAAATGAGTTCTTTT
CTTTCTATTGTCCACACTGCAATAGCTTTGAACCACTGATCCAAGGTCTGAAAAAAACGCTGCCAGAAAACGCTACTTTT
AAGAAAACTCACGTTTCATTCATGGGCGGAAAAATGGGCCTATCAATGAGTAAAGCATACGCAACAATGGTTTCTCTTGG
TATTGAAGACAAGATGGTTCCTGTGATGTTTAATCGTATCCATTCTATGCAAAAGCCACCACGTAATGACAAAGAATTAC
GTCAAATTTTCTTAGATGAAGGCGTAAATGCAGATGAGTTTGATGGCACATACAACAGCTTTGCTATTAACTCTATGGTT
AACCGTTTCGATAAATCATTCCAAGACAGTGGATTGACTGGTGTTCCAGCGCTTATGGTTAATAATAAATATCTGGTTGA
GACAAGCAAAATCAAAAGCACCGAAGAATACTACGAATTAGTTAACTGGTTGCTTAAAAAGTAA

Upstream 100 bases:

>100_bases
AGTCAGGTACTTGGTTTTAAAGAGCAAATAGCAGCGTTAAACGAAGCACCTTTAGAGTTGATGCCTCAATGGTAATAAAA
ATACAATAAAACAAACACAA

Downstream 100 bases:

>100_bases
ATTAACGATTTAAATTGAAAAGGGAGCGATAATCGCTCCCTTTTTTTTATCTATAGAATAAAGAGGTTATCTTTTCAAGA
TACGCTGTAGATACTCATCT

Product: thiol/disulfide interchange protein DsbA precursor

Products: 3-oxo-D 4-steroid; protein with oxidized disulfide bonds [C]

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDWRKLNMMKTMMALFGALVLSFSVNAANFTEGDYYKVLNLPESKTPTVNEFFSFYCPHCNSFEPLIQGLKKTLPENATF
KKTHVSFMGGKMGLSMSKAYATMVSLGIEDKMVPVMFNRIHSMQKPPRNDKELRQIFLDEGVNADEFDGTYNSFAINSMV
NRFDKSFQDSGLTGVPALMVNNKYLVETSKIKSTEEYYELVNWLLKK

Sequences:

>Translated_207_residues
MDWRKLNMMKTMMALFGALVLSFSVNAANFTEGDYYKVLNLPESKTPTVNEFFSFYCPHCNSFEPLIQGLKKTLPENATF
KKTHVSFMGGKMGLSMSKAYATMVSLGIEDKMVPVMFNRIHSMQKPPRNDKELRQIFLDEGVNADEFDGTYNSFAINSMV
NRFDKSFQDSGLTGVPALMVNNKYLVETSKIKSTEEYYELVNWLLKK
>Mature_207_residues
MDWRKLNMMKTMMALFGALVLSFSVNAANFTEGDYYKVLNLPESKTPTVNEFFSFYCPHCNSFEPLIQGLKKTLPENATF
KKTHVSFMGGKMGLSMSKAYATMVSLGIEDKMVPVMFNRIHSMQKPPRNDKELRQIFLDEGVNADEFDGTYNSFAINSMV
NRFDKSFQDSGLTGVPALMVNNKYLVETSKIKSTEEYYELVNWLLKK

Specific function: Involved in disulfide-bond formation. Required for the functional maturation of secreted virulence factors. Acts by transferring its disulfide bond to other proteins [H]

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1790291, Length=209, Percent_Identity=36.8421052631579, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1348 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR023205
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: NA

Molecular weight: Translated: 23663; Mature: 23663

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRKLNMMKTMMALFGALVLSFSVNAANFTEGDYYKVLNLPESKTPTVNEFFSFYCPHC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC
NSFEPLIQGLKKTLPENATFKKTHVSFMGGKMGLSMSKAYATMVSLGIEDKMVPVMFNRI
CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH
HSMQKPPRNDKELRQIFLDEGVNADEFDGTYNSFAINSMVNRFDKSFQDSGLTGVPALMV
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
NNKYLVETSKIKSTEEYYELVNWLLKK
CCEEEEEHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDWRKLNMMKTMMALFGALVLSFSVNAANFTEGDYYKVLNLPESKTPTVNEFFSFYCPHC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC
NSFEPLIQGLKKTLPENATFKKTHVSFMGGKMGLSMSKAYATMVSLGIEDKMVPVMFNRI
CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH
HSMQKPPRNDKELRQIFLDEGVNADEFDGTYNSFAINSMVNRFDKSFQDSGLTGVPALMV
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
NNKYLVETSKIKSTEEYYELVNWLLKK
CCEEEEEHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-oxo-D 5-steroid; protein with reduced SH groups [C]

Specific reaction: 3-oxo-D 5-steroid = 3-oxo-D 4-steroid protein with reduced SH groups = protein with oxidized disulfide bonds [C]

General reaction: Isomerases; Intramolecular Oxidoreductases; Transposing S-S Bonds [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1631111; 1324389; 10952301; 9149147 [H]