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The map label for this gene is soxC [H]

Identifier: 209550686

GI number: 209550686

Start: 3179870

End: 3180997

Strand: Direct

Name: soxC [H]

Synonym: Rleg2_3110

Alternate gene names: 209550686

Gene position: 3179870-3180997 (Clockwise)

Preceding gene: 209550684

Following gene: 209550689

Centisome position: 70.07

GC content: 64.63

Gene sequence:

>1128_bases
ATGGGAACGGTATCGCAGTTTCAGGATAGAAAAAGGCCTCCCGCGCATCGCATCGAAAGTGAAGAGGAGGCGATATCCAC
CGCCCGCGGCCTTGCCGCCGCATTCCGGCACCAGGCGAGCGAACGCGACATCAACCGCGTGCTGCCCTTTGCCGAACTCG
ACGCGCTGTCGGCATCGGGACTGACGGCGATCACTGTTCCGCCCGACCATCAAGGGCTCGACGTATCGAACGCGCTGCTC
GCCGAAATCGTCGCAATCATTGCCGAGGGCGATGCCTCGATCGGCGAGGCGCTGGAAAACCATTTCTGTGTGCTGGAAAC
GCTGCGCACCCAGGCGACCGAGGATCTGCAGGCATCGCTGTTTGCCCGGGTGTTGCTCGGTGAGCGCTTTGCAGGCGCCA
ACTTCATGGAAGGAACCGAGCTTACGGGCGAAGGCCCGGGTTACCGCCTGAGCGGGCGAACGCGACAGGCGTCCGGTATT
TTGTTCGCCGACTGGATCGCCGCTGTCGCCGCCGCTCCCCCCAGCCGTCCACTAACCCTTTACCTGGCAGGCGATGAGGA
AGGCCTGCAGGTGGTCGACGATTGGGACGGCTTCGGCCAGCGCACCAATGGATCGGCGACGGCGATCGTCGGCGCGCTTC
ATGTCAATGCCGATGCGATTGCGCCTGCCCCCTCCTCCGACGCTTCGACCGGCATCTCGCTCAGCCTGTTGCTCAAGGCA
AGCGTCAGCCTCGGCATCGCCCGGGCCGCCTGGAGCGACCTGATGACGGCAATTGGCGATCGCGACACGACGGTCCTTCC
CCGCATCGGCGAACGCGCCATCCGCATCGAAGCGACGGCGGCAGCCTTGGAACGGGCTGGCCGTAAACTCGACATTGCCC
AGGTCAATCCCGTCGAGGCCGCGATGGCGGACGCGCATTTCTCCGCCTCGGCGGCCGCAATCCTTGCTGGGGAAACGGCA
CTCGACACCGCAAACGCGCTGTTCGAACTGGCAGGGGAAACATCGGCTGGCATCGGGCTCAATCTCGACCGGCATTGGCG
CAATGCCCGCATTCACGCTCTATCGCTGCCACGGGACAGCCTGGTGCGTGCAGCAGGCGAATATCGGTCGAAGCCCGGCG
ACGCCTAA

Upstream 100 bases:

>100_bases
ATTGGAGCGATTTTCGGAAGGCACGAGGCGCCGAATGAGCCTGTTGCAGCGTTCTTCGCCCATCCGAAAAGACGCAGAGC
GCCGTAGGAAAGAGTGACCG

Downstream 100 bases:

>100_bases
AGCGTCGCATCAAACTTGATTCATGTGACGCCTAAAGCTCTTTGTTTTGATGCATGTCGTTATCCCGGAACCGCTGCACA
CTTCCGGGCGACATGCATTC

Product: acyl-CoA dehydrogenase type 2 domain-containing protein

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MGTVSQFQDRKRPPAHRIESEEEAISTARGLAAAFRHQASERDINRVLPFAELDALSASGLTAITVPPDHQGLDVSNALL
AEIVAIIAEGDASIGEALENHFCVLETLRTQATEDLQASLFARVLLGERFAGANFMEGTELTGEGPGYRLSGRTRQASGI
LFADWIAAVAAAPPSRPLTLYLAGDEEGLQVVDDWDGFGQRTNGSATAIVGALHVNADAIAPAPSSDASTGISLSLLLKA
SVSLGIARAAWSDLMTAIGDRDTTVLPRIGERAIRIEATAAALERAGRKLDIAQVNPVEAAMADAHFSASAAAILAGETA
LDTANALFELAGETSAGIGLNLDRHWRNARIHALSLPRDSLVRAAGEYRSKPGDA

Sequences:

>Translated_375_residues
MGTVSQFQDRKRPPAHRIESEEEAISTARGLAAAFRHQASERDINRVLPFAELDALSASGLTAITVPPDHQGLDVSNALL
AEIVAIIAEGDASIGEALENHFCVLETLRTQATEDLQASLFARVLLGERFAGANFMEGTELTGEGPGYRLSGRTRQASGI
LFADWIAAVAAAPPSRPLTLYLAGDEEGLQVVDDWDGFGQRTNGSATAIVGALHVNADAIAPAPSSDASTGISLSLLLKA
SVSLGIARAAWSDLMTAIGDRDTTVLPRIGERAIRIEATAAALERAGRKLDIAQVNPVEAAMADAHFSASAAAILAGETA
LDTANALFELAGETSAGIGLNLDRHWRNARIHALSLPRDSLVRAAGEYRSKPGDA
>Mature_374_residues
GTVSQFQDRKRPPAHRIESEEEAISTARGLAAAFRHQASERDINRVLPFAELDALSASGLTAITVPPDHQGLDVSNALLA
EIVAIIAEGDASIGEALENHFCVLETLRTQATEDLQASLFARVLLGERFAGANFMEGTELTGEGPGYRLSGRTRQASGIL
FADWIAAVAAAPPSRPLTLYLAGDEEGLQVVDDWDGFGQRTNGSATAIVGALHVNADAIAPAPSSDASTGISLSLLLKAS
VSLGIARAAWSDLMTAIGDRDTTVLPRIGERAIRIEATAAALERAGRKLDIAQVNPVEAAMADAHFSASAAAILAGETAL
DTANALFELAGETSAGIGLNLDRHWRNARIHALSLPRDSLVRAAGEYRSKPGDA

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 39327; Mature: 39196

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTVSQFQDRKRPPAHRIESEEEAISTARGLAAAFRHQASERDINRVLPFAELDALSASG
CCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
LTAITVPPDHQGLDVSNALLAEIVAIIAEGDASIGEALENHFCVLETLRTQATEDLQASL
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARVLLGERFAGANFMEGTELTGEGPGYRLSGRTRQASGILFADWIAAVAAAPPSRPLTL
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
YLAGDEEGLQVVDDWDGFGQRTNGSATAIVGALHVNADAIAPAPSSDASTGISLSLLLKA
EEECCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHH
SVSLGIARAAWSDLMTAIGDRDTTVLPRIGERAIRIEATAAALERAGRKLDIAQVNPVEA
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCHHH
AMADAHFSASAAAILAGETALDTANALFELAGETSAGIGLNLDRHWRNARIHALSLPRDS
HHHHHHCCCCHHEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEEECCHHH
LVRAAGEYRSKPGDA
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
GTVSQFQDRKRPPAHRIESEEEAISTARGLAAAFRHQASERDINRVLPFAELDALSASG
CCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
LTAITVPPDHQGLDVSNALLAEIVAIIAEGDASIGEALENHFCVLETLRTQATEDLQASL
EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARVLLGERFAGANFMEGTELTGEGPGYRLSGRTRQASGILFADWIAAVAAAPPSRPLTL
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
YLAGDEEGLQVVDDWDGFGQRTNGSATAIVGALHVNADAIAPAPSSDASTGISLSLLLKA
EEECCCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHH
SVSLGIARAAWSDLMTAIGDRDTTVLPRIGERAIRIEATAAALERAGRKLDIAQVNPVEA
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCHHH
AMADAHFSASAAAILAGETALDTANALFELAGETSAGIGLNLDRHWRNARIHALSLPRDS
HHHHHHCCCCHHEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEEECCHHH
LVRAAGEYRSKPGDA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]