Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is nhaK [H]
Identifier: 209550682
GI number: 209550682
Start: 3172633
End: 3174177
Strand: Direct
Name: nhaK [H]
Synonym: Rleg2_3106
Alternate gene names: 209550682
Gene position: 3172633-3174177 (Clockwise)
Preceding gene: 209550678
Following gene: 209550683
Centisome position: 69.91
GC content: 66.34
Gene sequence:
>1545_bases ATGGCGTTCTTCGAAAGCATGCTGACGCTGCTGCTGGTGGCGATCGTCTTCCTGCAATTCTCCAGGAAATTCCGCATCCC GTATCCGACCATGCTGGCGATCGCCGGCATCATCGTCGCCGCCGTGCCCTGGGCGCCCGAGGTCGCGATCGATCCTCAGC TGGCACTGGCACTGCTGATTGCGCCGGTGCTTTTCGACGCCGCCTATGATCTGCCGCCGCGGACATTGCGACGCAACTGG CTGCCGCTCTTCTCGCTCGCCGCCATCGCCGTGGTCCTGACAACAGCAGCCGTTGCCACCGTCGGCGTGACCATGGCCGG CCTGCCGCTCGCTGCAGCCGTGGCACTCGGTGCCATTGTCGCGCCGCCGGATGCTGCGGCGGCGACCGCCATGCTCGACC GCTTCGACCTGCCGCGCCAGACCTATGTGATCCTGAAAGGCGAGAGCCTTCTCAACGATGCCGTGGCGCTGCTGATCTTC AGCGCCGCGGTGGCGGCCGCCGCAAGCCCCGCCTTCTTTACCGGCGCCCTGGCGGAGCTGGCGCTGGCGGTGCCGGGCGG CCTCATCCTCGGCTATCTCCTCGGCCGTCTCTACATGGTGGTCGGGTTGAAGCTCGCCGGCACGCTCGGCGGCACCCTGC TCGAATTCGTCGCCACCTTCGGCACCTGGATCATCGCCGAGCGGCTGCACCTTTCGGCGATCCTCGCCATCGTCGTCTAT GCGATGGTGATCGCCCGCTACATGCCCGAGCGGCAGACGGCCCGCCACCGCATTCATTCCTATTCGGTCTGGGAAGCCGC GGTCTTCCTGCTCAACGTGCTCGCCTTCCTGCTGATGGGCCTGCAAGTCCGCCAGATCGTCCTCGACCTCGATCCCGGCC GGCTGAATTACGCAATCACCCTGGCCGCCGCGGTCTTCGTCACTGTCATCGGCGTGCGCCTGGCCTGGGTGCTCCTCTAT AACCGCGTGATCACCTTCCTCGCCGAGCGCGGCTACACCAGACAGGCCGTTCCCACCTTCGCGACCAGCCTGCTTGCCGG CTGGTGCGGCATGCGCGGCCTCGTGACGCTGGCGACTGCGCTGGCGCTGCCGATCGACTTCCCCGATCGCGACATCATTC TCCTGAGTGCGCTGGCCGTCGTTCTCGGCACTCTCATCGTCCAGGGCCTGACGCTCGGGCCGCTGATCCGCGTCCTGAAA TTCGAGCCGGACACCTCGCTCGACCGCAACCTCACCAGAGCCCGGGTCGCGTTGATCGATGCGGCGCTGGCCGAACTTGC CGACGGCGAGGATAAATCCACCCGCATCCTGCGCGACGTCTACACCTCCGAGCGCGAGATCACCGCCGACGGGAAACATC CACGCGAAGTCAGCAGCCTTGATAAGCAGCGCCGCAGCGTCATTGCCGCCAAACGCCGCAAACTGGCAGCGATGCGCCGC GCCGACGAGATCGACGACGATGTCTTCCATATGCTGGAACAGGAGCTCGACTGGGCCGAACTCGCCGTCTTGCCGCCCGG CCGCGACGAGATCGTCGAGAGCTGA
Upstream 100 bases:
>100_bases TCTCTTGCGGGAGCAAGACTTCCGTCCAGTGGCCGCAACCCGGCTTCGGCCCTAGTTTCGGGCAGAGATCGCCTCCGCCG GAGGTGCGCAGGAGGGCTCG
Downstream 100 bases:
>100_bases CGCCATCCATGAAGTTTTGATGGATTTCGCAACCCCAGCCAATTGGCATTTGCTATTTTTCGCCGCTGCCGTTTATATCC GGTTCTACAAGTTACGATTT
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MAFFESMLTLLLVAIVFLQFSRKFRIPYPTMLAIAGIIVAAVPWAPEVAIDPQLALALLIAPVLFDAAYDLPPRTLRRNW LPLFSLAAIAVVLTTAAVATVGVTMAGLPLAAAVALGAIVAPPDAAAATAMLDRFDLPRQTYVILKGESLLNDAVALLIF SAAVAAAASPAFFTGALAELALAVPGGLILGYLLGRLYMVVGLKLAGTLGGTLLEFVATFGTWIIAERLHLSAILAIVVY AMVIARYMPERQTARHRIHSYSVWEAAVFLLNVLAFLLMGLQVRQIVLDLDPGRLNYAITLAAAVFVTVIGVRLAWVLLY NRVITFLAERGYTRQAVPTFATSLLAGWCGMRGLVTLATALALPIDFPDRDIILLSALAVVLGTLIVQGLTLGPLIRVLK FEPDTSLDRNLTRARVALIDAALAELADGEDKSTRILRDVYTSEREITADGKHPREVSSLDKQRRSVIAAKRRKLAAMRR ADEIDDDVFHMLEQELDWAELAVLPPGRDEIVES
Sequences:
>Translated_514_residues MAFFESMLTLLLVAIVFLQFSRKFRIPYPTMLAIAGIIVAAVPWAPEVAIDPQLALALLIAPVLFDAAYDLPPRTLRRNW LPLFSLAAIAVVLTTAAVATVGVTMAGLPLAAAVALGAIVAPPDAAAATAMLDRFDLPRQTYVILKGESLLNDAVALLIF SAAVAAAASPAFFTGALAELALAVPGGLILGYLLGRLYMVVGLKLAGTLGGTLLEFVATFGTWIIAERLHLSAILAIVVY AMVIARYMPERQTARHRIHSYSVWEAAVFLLNVLAFLLMGLQVRQIVLDLDPGRLNYAITLAAAVFVTVIGVRLAWVLLY NRVITFLAERGYTRQAVPTFATSLLAGWCGMRGLVTLATALALPIDFPDRDIILLSALAVVLGTLIVQGLTLGPLIRVLK FEPDTSLDRNLTRARVALIDAALAELADGEDKSTRILRDVYTSEREITADGKHPREVSSLDKQRRSVIAAKRRKLAAMRR ADEIDDDVFHMLEQELDWAELAVLPPGRDEIVES >Mature_513_residues AFFESMLTLLLVAIVFLQFSRKFRIPYPTMLAIAGIIVAAVPWAPEVAIDPQLALALLIAPVLFDAAYDLPPRTLRRNWL PLFSLAAIAVVLTTAAVATVGVTMAGLPLAAAVALGAIVAPPDAAAATAMLDRFDLPRQTYVILKGESLLNDAVALLIFS AAVAAAASPAFFTGALAELALAVPGGLILGYLLGRLYMVVGLKLAGTLGGTLLEFVATFGTWIIAERLHLSAILAIVVYA MVIARYMPERQTARHRIHSYSVWEAAVFLLNVLAFLLMGLQVRQIVLDLDPGRLNYAITLAAAVFVTVIGVRLAWVLLYN RVITFLAERGYTRQAVPTFATSLLAGWCGMRGLVTLATALALPIDFPDRDIILLSALAVVLGTLIVQGLTLGPLIRVLKF EPDTSLDRNLTRARVALIDAALAELADGEDKSTRILRDVYTSEREITADGKHPREVSSLDKQRRSVIAAKRRKLAAMRRA DEIDDDVFHMLEQELDWAELAVLPPGRDEIVES
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Homo sapiens, GI15529998, Length=431, Percent_Identity=22.969837587007, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI148727259, Length=475, Percent_Identity=21.8947368421053, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI41872703, Length=481, Percent_Identity=22.037422037422, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI14211919, Length=260, Percent_Identity=25.7692307692308, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI194239733, Length=383, Percent_Identity=24.8041775456919, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4759144, Length=387, Percent_Identity=24.031007751938, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI27734935, Length=415, Percent_Identity=22.6506024096386, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1790501, Length=519, Percent_Identity=27.7456647398844, Blast_Score=142, Evalue=6e-35, Organism=Caenorhabditis elegans, GI71980847, Length=473, Percent_Identity=20.507399577167, Blast_Score=82, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71999817, Length=387, Percent_Identity=21.9638242894057, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71999819, Length=407, Percent_Identity=21.8673218673219, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71999821, Length=381, Percent_Identity=22.3097112860892, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71993590, Length=492, Percent_Identity=21.3414634146341, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71993582, Length=492, Percent_Identity=21.3414634146341, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71990932, Length=404, Percent_Identity=20.7920792079208, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25150332, Length=396, Percent_Identity=22.2222222222222, Blast_Score=68, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71990924, Length=404, Percent_Identity=20.7920792079208, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992101, Length=252, Percent_Identity=23.4126984126984, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992107, Length=252, Percent_Identity=23.4126984126984, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147678, Length=448, Percent_Identity=22.5446428571429, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71987537, Length=378, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71987535, Length=378, Percent_Identity=22.2222222222222, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320663, Length=517, Percent_Identity=20.3094777562863, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI281360447, Length=375, Percent_Identity=23.2, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI221510734, Length=383, Percent_Identity=24.2819843342037, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI221510738, Length=383, Percent_Identity=24.2819843342037, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 55605; Mature: 55473
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFFESMLTLLLVAIVFLQFSRKFRIPYPTMLAIAGIIVAAVPWAPEVAIDPQLALALLI CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH APVLFDAAYDLPPRTLRRNWLPLFSLAAIAVVLTTAAVATVGVTMAGLPLAAAVALGAIV HHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APPDAAAATAMLDRFDLPRQTYVILKGESLLNDAVALLIFSAAVAAAASPAFFTGALAEL CCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALAVPGGLILGYLLGRLYMVVGLKLAGTLGGTLLEFVATFGTWIIAERLHLSAILAIVVY HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVIARYMPERQTARHRIHSYSVWEAAVFLLNVLAFLLMGLQVRQIVLDLDPGRLNYAIT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LAAAVFVTVIGVRLAWVLLYNRVITFLAERGYTRQAVPTFATSLLAGWCGMRGLVTLATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LALPIDFPDRDIILLSALAVVLGTLIVQGLTLGPLIRVLKFEPDTSLDRNLTRARVALID HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AALAELADGEDKSTRILRDVYTSEREITADGKHPREVSSLDKQRRSVIAAKRRKLAAMRR HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADEIDDDVFHMLEQELDWAELAVLPPGRDEIVES HHCCCHHHHHHHHHCCCHHHEEECCCCHHHHCCC >Mature Secondary Structure AFFESMLTLLLVAIVFLQFSRKFRIPYPTMLAIAGIIVAAVPWAPEVAIDPQLALALLI HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH APVLFDAAYDLPPRTLRRNWLPLFSLAAIAVVLTTAAVATVGVTMAGLPLAAAVALGAIV HHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC APPDAAAATAMLDRFDLPRQTYVILKGESLLNDAVALLIFSAAVAAAASPAFFTGALAEL CCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALAVPGGLILGYLLGRLYMVVGLKLAGTLGGTLLEFVATFGTWIIAERLHLSAILAIVVY HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMVIARYMPERQTARHRIHSYSVWEAAVFLLNVLAFLLMGLQVRQIVLDLDPGRLNYAIT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LAAAVFVTVIGVRLAWVLLYNRVITFLAERGYTRQAVPTFATSLLAGWCGMRGLVTLATA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LALPIDFPDRDIILLSALAVVLGTLIVQGLTLGPLIRVLKFEPDTSLDRNLTRARVALID HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AALAELADGEDKSTRILRDVYTSEREITADGKHPREVSSLDKQRRSVIAAKRRKLAAMRR HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ADEIDDDVFHMLEQELDWAELAVLPPGRDEIVES HHCCCHHHHHHHHHCCCHHHEEECCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA