Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is 209550678
Identifier: 209550678
GI number: 209550678
Start: 3168556
End: 3169173
Strand: Direct
Name: 209550678
Synonym: Rleg2_3102
Alternate gene names: NA
Gene position: 3168556-3169173 (Clockwise)
Preceding gene: 209550677
Following gene: 209550682
Centisome position: 69.82
GC content: 63.11
Gene sequence:
>618_bases ATGTTATCTGCATCGGCCATGATCGATGGTGGAATGATATCGGGCGCGATCGGCGCCGGCGCGCTCACCGACGAAAGCCT CAGTGCGTTTTTCGAGCGAGACGCGATCGCCGTTGCCCGGGATCTGCTCGGCTGCCATCTCACAGTCGATGGCGCCGGCG GCCGGATCACCGAGACGGAGGCCTATTTCCCCGATGACGAGGCCTCGCACAGCTTCCGCGGCCCGACCAAGCGCAACGGC GCTATGTACGGCCGGCCCGGCAATGTCTACATTTACCGCATCTATGGCATGTATTGGTGCCTGAATTTCGTCTGCCATCC GGGCTCGGCCGTGCTCATCCGGGCGCTCGAGCCGGAAACGGGAATCCCCTTGATGATGGAGCGGCGCGGCACCGATAGGC TGACCGCGCTCTGCAGCGGCCCCGGCAAATTGTGCCAGGCGCTCGGCATCGACATCGAAATCAACGACCGTCTGCTCGAC CGCCCGCCCTATGCGCTGACACCGTCCGTGCCGGTGCCTGTCGTCTCGGGAAAACGCATCGGCATCACCAAAAATGCCGC AGTGCCATGGCGCTTCGGCATTCAGGGATCGCGTTATCTCAGCAAGCCGTTTCGCTGA
Upstream 100 bases:
>100_bases CGGTCACCGTCTCCTCGATCCCGATGCGGGATCCGAATGCCGGCCGTTAATGCATAGCCCAAAGCATGAAGCGGTTTGGA GATGACGGCGAGTGCACTGG
Downstream 100 bases:
>100_bases TTATTCCATCACCGCACTGTGGTCGACGGCGGGCGCCGCCTTCGGCTTACGCAGCAGCAGCGCCAGCGGAATGACCGCGA GCGACATCAGCATCAGGAGC
Product: 3-methyladenine DNA glycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETEAYFPDDEASHSFRGPTKRNG AMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPETGIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLD RPPYALTPSVPVPVVSGKRIGITKNAAVPWRFGIQGSRYLSKPFR
Sequences:
>Translated_205_residues MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETEAYFPDDEASHSFRGPTKRNG AMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPETGIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLD RPPYALTPSVPVPVVSGKRIGITKNAAVPWRFGIQGSRYLSKPFR >Mature_205_residues MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETEAYFPDDEASHSFRGPTKRNG AMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPETGIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLD RPPYALTPSVPVPVVSGKRIGITKNAAVPWRFGIQGSRYLSKPFR
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family [H]
Homologues:
Organism=Homo sapiens, GI62632769, Length=199, Percent_Identity=40.2010050251256, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI62632771, Length=199, Percent_Identity=40.2010050251256, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI62632765, Length=199, Percent_Identity=40.2010050251256, Blast_Score=105, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011034 - InterPro: IPR003180 [H]
Pfam domain/function: PF02245 Pur_DNA_glyco [H]
EC number: 3.2.2.-
Molecular weight: Translated: 22142; Mature: 22142
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETE CCCCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC AYFPDDEASHSFRGPTKRNGAMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPET CCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCC GIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLDRPPYALTPSVPVPVVSGKRI CCCEEEECCCCCCEEEEECCHHHHHHHHCCCEEECCCEECCCCCEECCCCCCCCCCCCEE GITKNAAVPWRFGIQGSRYLSKPFR CEECCCCCCEEECCCCCHHHCCCCC >Mature Secondary Structure MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETE CCCCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC AYFPDDEASHSFRGPTKRNGAMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPET CCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCC GIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLDRPPYALTPSVPVPVVSGKRI CCCEEEECCCCCCEEEEECCHHHHHHHHCCCEEECCCEECCCCCEECCCCCCCCCCCCEE GITKNAAVPWRFGIQGSRYLSKPFR CEECCCCCCEEECCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA