Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is 209550678

Identifier: 209550678

GI number: 209550678

Start: 3168556

End: 3169173

Strand: Direct

Name: 209550678

Synonym: Rleg2_3102

Alternate gene names: NA

Gene position: 3168556-3169173 (Clockwise)

Preceding gene: 209550677

Following gene: 209550682

Centisome position: 69.82

GC content: 63.11

Gene sequence:

>618_bases
ATGTTATCTGCATCGGCCATGATCGATGGTGGAATGATATCGGGCGCGATCGGCGCCGGCGCGCTCACCGACGAAAGCCT
CAGTGCGTTTTTCGAGCGAGACGCGATCGCCGTTGCCCGGGATCTGCTCGGCTGCCATCTCACAGTCGATGGCGCCGGCG
GCCGGATCACCGAGACGGAGGCCTATTTCCCCGATGACGAGGCCTCGCACAGCTTCCGCGGCCCGACCAAGCGCAACGGC
GCTATGTACGGCCGGCCCGGCAATGTCTACATTTACCGCATCTATGGCATGTATTGGTGCCTGAATTTCGTCTGCCATCC
GGGCTCGGCCGTGCTCATCCGGGCGCTCGAGCCGGAAACGGGAATCCCCTTGATGATGGAGCGGCGCGGCACCGATAGGC
TGACCGCGCTCTGCAGCGGCCCCGGCAAATTGTGCCAGGCGCTCGGCATCGACATCGAAATCAACGACCGTCTGCTCGAC
CGCCCGCCCTATGCGCTGACACCGTCCGTGCCGGTGCCTGTCGTCTCGGGAAAACGCATCGGCATCACCAAAAATGCCGC
AGTGCCATGGCGCTTCGGCATTCAGGGATCGCGTTATCTCAGCAAGCCGTTTCGCTGA

Upstream 100 bases:

>100_bases
CGGTCACCGTCTCCTCGATCCCGATGCGGGATCCGAATGCCGGCCGTTAATGCATAGCCCAAAGCATGAAGCGGTTTGGA
GATGACGGCGAGTGCACTGG

Downstream 100 bases:

>100_bases
TTATTCCATCACCGCACTGTGGTCGACGGCGGGCGCCGCCTTCGGCTTACGCAGCAGCAGCGCCAGCGGAATGACCGCGA
GCGACATCAGCATCAGGAGC

Product: 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETEAYFPDDEASHSFRGPTKRNG
AMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPETGIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLD
RPPYALTPSVPVPVVSGKRIGITKNAAVPWRFGIQGSRYLSKPFR

Sequences:

>Translated_205_residues
MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETEAYFPDDEASHSFRGPTKRNG
AMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPETGIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLD
RPPYALTPSVPVPVVSGKRIGITKNAAVPWRFGIQGSRYLSKPFR
>Mature_205_residues
MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETEAYFPDDEASHSFRGPTKRNG
AMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPETGIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLD
RPPYALTPSVPVPVVSGKRIGITKNAAVPWRFGIQGSRYLSKPFR

Specific function: Unknown

COG id: COG2094

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA glycosylase MPG family [H]

Homologues:

Organism=Homo sapiens, GI62632769, Length=199, Percent_Identity=40.2010050251256, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI62632771, Length=199, Percent_Identity=40.2010050251256, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI62632765, Length=199, Percent_Identity=40.2010050251256, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011034
- InterPro:   IPR003180 [H]

Pfam domain/function: PF02245 Pur_DNA_glyco [H]

EC number: 3.2.2.-

Molecular weight: Translated: 22142; Mature: 22142

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETE
CCCCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC
AYFPDDEASHSFRGPTKRNGAMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPET
CCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCC
GIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLDRPPYALTPSVPVPVVSGKRI
CCCEEEECCCCCCEEEEECCHHHHHHHHCCCEEECCCEECCCCCEECCCCCCCCCCCCEE
GITKNAAVPWRFGIQGSRYLSKPFR
CEECCCCCCEEECCCCCHHHCCCCC
>Mature Secondary Structure
MLSASAMIDGGMISGAIGAGALTDESLSAFFERDAIAVARDLLGCHLTVDGAGGRITETE
CCCCCCEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC
AYFPDDEASHSFRGPTKRNGAMYGRPGNVYIYRIYGMYWCLNFVCHPGSAVLIRALEPET
CCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCC
GIPLMMERRGTDRLTALCSGPGKLCQALGIDIEINDRLLDRPPYALTPSVPVPVVSGKRI
CCCEEEECCCCCCEEEEECCHHHHHHHHCCCEEECCCEECCCCCEECCCCCCCCCCCCEE
GITKNAAVPWRFGIQGSRYLSKPFR
CEECCCCCCEEECCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA