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The map label for this gene is ycbK [H]

Identifier: 209550509

GI number: 209550509

Start: 2990924

End: 2992282

Strand: Direct

Name: ycbK [H]

Synonym: Rleg2_2932

Alternate gene names: 209550509

Gene position: 2990924-2992282 (Clockwise)

Preceding gene: 209550507

Following gene: 209550512

Centisome position: 65.91

GC content: 63.28

Gene sequence:

>1359_bases
TTGAAGTATTCACTGCAAGGTTTGTCAGGCGGAATTGCCACGCTCCTGTCGCGTGTTGAGCGCTTCGCAGCGCAGACCAT
TCTGCCGGCTCTGTTTGCGCTGCCGGCGCTTGTCGGTTCCGCATCATTTGCCTCGGCTGAGGATCGCGCCCTGAAGCTGT
TCTTTACCCATACGGGTGAGAAGGCGACGATTACCTATAAGCGCGACGGAAAGTTCGATCCCAAAGGCCTTGCCCAGATC
AATCGTTTTTTGCGCGACTGGCGAAGGAACGAGCCGACCCGGATGGATCCCCGGCTGCTCGACCTGGTCTGGGAGGTGTA
CAAGCGCAGCGGCGGCAAGGATTATATCCACATCGTCTCCGCCTATCGATCTCCCACCACCAACAACATGCTCCGCAACC
GGTCGCGCAGCACGGGTGTCGCCAAGAAGAGCCAGCACATGCTGGGTAAGGCGATGGACTTTTACGTTCCCGGCGTGAAG
CTTGCGACGCTGCGGGCGCTTGCCATGCAGATGCAGGTTGGCGGTGTCGGATATTATCCGACCTCGGGATCGCCCTTCGT
GCATCTCGACGTCGGCAATGTCCGGGCCTGGCCCCGCATGTCCCGGCAGGAACTCGCGCGGATATTCCCGAATGGGCAGA
CCATGCATCTGCCGGCCGATGGCCGGCCGCTGCCGGGATACAGTCAGGCGATTGCCAACTACAAGAAGCGCGTCAGCCCC
ACCGCGATCCAGATTGCCAGCACCGCTGGAGAAGACGAAGAGGTGGTGGTGTCGACCACGCCGAGCGGCGGCGCCAGAGA
CGGCAACCTCGTGACGGCGCTTTTGCCGACGCCGAAAAGCCGGGCATTGAATGCGCTCGCGCAGCAGACCGGCGCGGCCG
AGCGGGATGACAAAGGCCCCGCTCCGGATCTTTCATCTTTGCAGATTCCGATACCGGCGATGCGGCCGCCTGCCCTTGCG
CACGAAACCGATGTGGACGACGAACTGGAGACGGCGTCGATCGGCCCGATTGCCGCACTTCCTGGGAGACAGATCTCGGC
ATTGCCTGATCACGCCCGCTTCCATCCCCGCATTGTTGCAGCGGAGGCCTCCCGGCCGGGCGCCAGCATGATCGCCGCCC
TGCCGATGACCGCCTCCTGGGAAGATCCACATTTCCTCGGATCGACCTCCGACGCGGCGCTGATGGAATGGGCGCTGCAT
TCGCCAGGCGAGGCGATGGGATTGAGCGCGCCTCGTCTTTCCCCCCGCACGGTCCATCGTGAGGCTGAGGTCGCGACGTC
GGGTGATGAGGTCATCCCGGTCGCTACCAGAGGCCCGTTCGATGCCAGCCGGTTTGCGGCATCGCCTCCCGAGGGCTGA

Upstream 100 bases:

>100_bases
CGTTAGCAATTTGTTGACCATAAGCTGGCTTTACTAATCCCGATGGATGCGGAGTTCCCGCCAGTCGTCGAGTGTTTTGT
GTGAGACGGGATTGTTAGCG

Downstream 100 bases:

>100_bases
CCTCGAACGTCAGCCTGTGCGCTGCGCCTGAGACAAAAGCAGGCGCCCCGACCACATCGATATCATCGAGATCATGGTGA
TGGGGAGCCTGGGAGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MKYSLQGLSGGIATLLSRVERFAAQTILPALFALPALVGSASFASAEDRALKLFFTHTGEKATITYKRDGKFDPKGLAQI
NRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVK
LATLRALAMQMQVGGVGYYPTSGSPFVHLDVGNVRAWPRMSRQELARIFPNGQTMHLPADGRPLPGYSQAIANYKKRVSP
TAIQIASTAGEDEEVVVSTTPSGGARDGNLVTALLPTPKSRALNALAQQTGAAERDDKGPAPDLSSLQIPIPAMRPPALA
HETDVDDELETASIGPIAALPGRQISALPDHARFHPRIVAAEASRPGASMIAALPMTASWEDPHFLGSTSDAALMEWALH
SPGEAMGLSAPRLSPRTVHREAEVATSGDEVIPVATRGPFDASRFAASPPEG

Sequences:

>Translated_452_residues
MKYSLQGLSGGIATLLSRVERFAAQTILPALFALPALVGSASFASAEDRALKLFFTHTGEKATITYKRDGKFDPKGLAQI
NRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVK
LATLRALAMQMQVGGVGYYPTSGSPFVHLDVGNVRAWPRMSRQELARIFPNGQTMHLPADGRPLPGYSQAIANYKKRVSP
TAIQIASTAGEDEEVVVSTTPSGGARDGNLVTALLPTPKSRALNALAQQTGAAERDDKGPAPDLSSLQIPIPAMRPPALA
HETDVDDELETASIGPIAALPGRQISALPDHARFHPRIVAAEASRPGASMIAALPMTASWEDPHFLGSTSDAALMEWALH
SPGEAMGLSAPRLSPRTVHREAEVATSGDEVIPVATRGPFDASRFAASPPEG
>Mature_452_residues
MKYSLQGLSGGIATLLSRVERFAAQTILPALFALPALVGSASFASAEDRALKLFFTHTGEKATITYKRDGKFDPKGLAQI
NRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVSAYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVK
LATLRALAMQMQVGGVGYYPTSGSPFVHLDVGNVRAWPRMSRQELARIFPNGQTMHLPADGRPLPGYSQAIANYKKRVSP
TAIQIASTAGEDEEVVVSTTPSGGARDGNLVTALLPTPKSRALNALAQQTGAAERDDKGPAPDLSSLQIPIPAMRPPALA
HETDVDDELETASIGPIAALPGRQISALPDHARFHPRIVAAEASRPGASMIAALPMTASWEDPHFLGSTSDAALMEWALH
SPGEAMGLSAPRLSPRTVHREAEVATSGDEVIPVATRGPFDASRFAASPPEG

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=162, Percent_Identity=41.9753086419753, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 48670; Mature: 48670

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSLQGLSGGIATLLSRVERFAAQTILPALFALPALVGSASFASAEDRALKLFFTHTGE
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC
KATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVS
EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
AYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRALAMQMQVGGVGYYP
HHCCCCHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECC
TSGSPFVHLDVGNVRAWPRMSRQELARIFPNGQTMHLPADGRPLPGYSQAIANYKKRVSP
CCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC
TAIQIASTAGEDEEVVVSTTPSGGARDGNLVTALLPTPKSRALNALAQQTGAAERDDKGP
CEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
APDLSSLQIPIPAMRPPALAHETDVDDELETASIGPIAALPGRQISALPDHARFHPRIVA
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE
AEASRPGASMIAALPMTASWEDPHFLGSTSDAALMEWALHSPGEAMGLSAPRLSPRTVHR
ECCCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCHHHHC
EAEVATSGDEVIPVATRGPFDASRFAASPPEG
HHHHCCCCCCEEEEECCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MKYSLQGLSGGIATLLSRVERFAAQTILPALFALPALVGSASFASAEDRALKLFFTHTGE
CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCC
KATITYKRDGKFDPKGLAQINRFLRDWRRNEPTRMDPRLLDLVWEVYKRSGGKDYIHIVS
EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
AYRSPTTNNMLRNRSRSTGVAKKSQHMLGKAMDFYVPGVKLATLRALAMQMQVGGVGYYP
HHCCCCHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECC
TSGSPFVHLDVGNVRAWPRMSRQELARIFPNGQTMHLPADGRPLPGYSQAIANYKKRVSP
CCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC
TAIQIASTAGEDEEVVVSTTPSGGARDGNLVTALLPTPKSRALNALAQQTGAAERDDKGP
CEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCC
APDLSSLQIPIPAMRPPALAHETDVDDELETASIGPIAALPGRQISALPDHARFHPRIVA
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEE
AEASRPGASMIAALPMTASWEDPHFLGSTSDAALMEWALHSPGEAMGLSAPRLSPRTVHR
ECCCCCCCHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCHHHHC
EAEVATSGDEVIPVATRGPFDASRFAASPPEG
HHHHCCCCCCEEEEECCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]