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The map label for this gene is lpcC [H]

Identifier: 209550296

GI number: 209550296

Start: 2761402

End: 2762460

Strand: Direct

Name: lpcC [H]

Synonym: Rleg2_2716

Alternate gene names: 209550296

Gene position: 2761402-2762460 (Clockwise)

Preceding gene: 209550295

Following gene: 209550298

Centisome position: 60.85

GC content: 65.63

Gene sequence:

>1059_bases
TTGCCTGATTTGCGTGACGTCGAGATCATCGCGCCCAATTTCAAGCGCCGGCTCTCCGGCGTCACGTCGACCATCGTCCA
GCTCATCCCCTGCCAGATCCGGCTCGGCATGAGGATCGCAACGCTCGGCCCCGGCCTGCCGGAAGGCTTGGCGAAGCTGA
GATGGTCGCAGCTCCTTGGCCTCTGGCGCCCGCCGGCGCGCCGGCGGCGGCGTGTCTGGCACGCCCGCCGCAACAACGAG
ATGGCCGTCGGCATCCTGCTTCGCTATCTCCTGCGCATGCCGCTGAAGCTCCTCTTCACTTCGGCCGCGCAGCGCCGCCA
TACCGCCTATACGAAATGGCTGATCCGCCGCATGGACGCAGTGATCGCGACCAGTGACCGCTCCGGCTCGTTCCTCGAGG
TGCCCCACACGGTCATCCAGCACGGCGTCGACCTTTCGCTGTTCCATCCGCCGGAAACGGCGGAAGACGGCATTGCCGCC
ACCGGCCTGCCCGGCCGCCATCTGGTCGGCTGTTTCGGCCGCGTGCGCCATCAGAAGGGCACCGATCTTTTCGTCCGGGC
AATGATCGAACTCCTGCCGCAGCACCCGGAATGGACGGCGGTTGTTTCCGGCCGGGTGACGGCCGAGCACACCGCCTTCG
CAGACAAGCTCAAAGCGGATGTCGCCGCCGCCGGCCTCAGCGAACGCATCCTCTTTCTCGGCGAAGTGCCCGATATCAAG
GTGTGGTACCGCCGCCTGACGCTTTATGTCGCCCCCTCCCGCAACGAAGGTTTCGGCCTGACCCCGCTCGAGGCCATGGC
GTCGCGAACGGCGGTGGTGGCATCCGACGCCGGCGCCTATGCCGAACTCATTGCCGAAGGTGAGACCGGCTCGGTGGTGG
CTGCCGGCAACAGTGAAGCACTGACACAGGCGATCGCCCCCTATATCGCCGATCCCGCTTTGGCGATTGCCCATGGCGAG
AATGCGCTGCGCCATGTCAGAGCGAATTTTGCGCTGGAGAAGGAAGCAAACGCGATCGGCGCAGTCTACGATCGCCTTCT
CGGTGACAACCGCGGCTAA

Upstream 100 bases:

>100_bases
CGGCGATTCCATCGAGGTCAATGCGCCCGGTGGCTCCAAGGCCTACGAAATCCTCCAGGTTTCCTGGGGCTGATCGCCCG
CCACAGACGAGACCCCTCCC

Downstream 100 bases:

>100_bases
AACAGCCCGTTGAGCAGCAGTCATACTCGAGCTTGTCCCGCGGCTGTCCGGTTGATGCTGATTGAACGACCGGATTGATG
GTCGACACTTTGGACCGGGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MPDLRDVEIIAPNFKRRLSGVTSTIVQLIPCQIRLGMRIATLGPGLPEGLAKLRWSQLLGLWRPPARRRRRVWHARRNNE
MAVGILLRYLLRMPLKLLFTSAAQRRHTAYTKWLIRRMDAVIATSDRSGSFLEVPHTVIQHGVDLSLFHPPETAEDGIAA
TGLPGRHLVGCFGRVRHQKGTDLFVRAMIELLPQHPEWTAVVSGRVTAEHTAFADKLKADVAAAGLSERILFLGEVPDIK
VWYRRLTLYVAPSRNEGFGLTPLEAMASRTAVVASDAGAYAELIAEGETGSVVAAGNSEALTQAIAPYIADPALAIAHGE
NALRHVRANFALEKEANAIGAVYDRLLGDNRG

Sequences:

>Translated_352_residues
MPDLRDVEIIAPNFKRRLSGVTSTIVQLIPCQIRLGMRIATLGPGLPEGLAKLRWSQLLGLWRPPARRRRRVWHARRNNE
MAVGILLRYLLRMPLKLLFTSAAQRRHTAYTKWLIRRMDAVIATSDRSGSFLEVPHTVIQHGVDLSLFHPPETAEDGIAA
TGLPGRHLVGCFGRVRHQKGTDLFVRAMIELLPQHPEWTAVVSGRVTAEHTAFADKLKADVAAAGLSERILFLGEVPDIK
VWYRRLTLYVAPSRNEGFGLTPLEAMASRTAVVASDAGAYAELIAEGETGSVVAAGNSEALTQAIAPYIADPALAIAHGE
NALRHVRANFALEKEANAIGAVYDRLLGDNRG
>Mature_351_residues
PDLRDVEIIAPNFKRRLSGVTSTIVQLIPCQIRLGMRIATLGPGLPEGLAKLRWSQLLGLWRPPARRRRRVWHARRNNEM
AVGILLRYLLRMPLKLLFTSAAQRRHTAYTKWLIRRMDAVIATSDRSGSFLEVPHTVIQHGVDLSLFHPPETAEDGIAAT
GLPGRHLVGCFGRVRHQKGTDLFVRAMIELLPQHPEWTAVVSGRVTAEHTAFADKLKADVAAAGLSERILFLGEVPDIKV
WYRRLTLYVAPSRNEGFGLTPLEAMASRTAVVASDAGAYAELIAEGETGSVVAAGNSEALTQAIAPYIADPALAIAHGEN
ALRHVRANFALEKEANAIGAVYDRLLGDNRG

Specific function: Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 38640; Mature: 38509

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLRDVEIIAPNFKRRLSGVTSTIVQLIPCQIRLGMRIATLGPGLPEGLAKLRWSQLLG
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHH
LWRPPARRRRRVWHARRNNEMAVGILLRYLLRMPLKLLFTSAAQRRHTAYTKWLIRRMDA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIATSDRSGSFLEVPHTVIQHGVDLSLFHPPETAEDGIAATGLPGRHLVGCFGRVRHQKG
HEEECCCCCCEEECCHHHHHCCCCEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCC
TDLFVRAMIELLPQHPEWTAVVSGRVTAEHTAFADKLKADVAAAGLSERILFLGEVPDIK
CHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHCEEEECCCCCHH
VWYRRLTLYVAPSRNEGFGLTPLEAMASRTAVVASDAGAYAELIAEGETGSVVAAGNSEA
HHEEEEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHCCCCCCCEEECCCHHH
LTQAIAPYIADPALAIAHGENALRHVRANFALEKEANAIGAVYDRLLGDNRG
HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PDLRDVEIIAPNFKRRLSGVTSTIVQLIPCQIRLGMRIATLGPGLPEGLAKLRWSQLLG
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHH
LWRPPARRRRRVWHARRNNEMAVGILLRYLLRMPLKLLFTSAAQRRHTAYTKWLIRRMDA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIATSDRSGSFLEVPHTVIQHGVDLSLFHPPETAEDGIAATGLPGRHLVGCFGRVRHQKG
HEEECCCCCCEEECCHHHHHCCCCEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCC
TDLFVRAMIELLPQHPEWTAVVSGRVTAEHTAFADKLKADVAAAGLSERILFLGEVPDIK
CHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHCEEEECCCCCHH
VWYRRLTLYVAPSRNEGFGLTPLEAMASRTAVVASDAGAYAELIAEGETGSVVAAGNSEA
HHEEEEEEEEECCCCCCCCCCHHHHHHCCCEEEECCCCHHHHHHCCCCCCCEEECCCHHH
LTQAIAPYIADPALAIAHGENALRHVRANFALEKEANAIGAVYDRLLGDNRG
HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9756877 [H]