Click here to switch to the map view.

The map label for this gene is yqjF [C]

Identifier: 209549473

GI number: 209549473

Start: 1924894

End: 1925286

Strand: Reverse

Name: yqjF [C]

Synonym: Rleg2_1879

Alternate gene names: 209549473

Gene position: 1925286-1924894 (Counterclockwise)

Preceding gene: 209549474

Following gene: 209549465

Centisome position: 42.43

GC content: 61.07

Gene sequence:

>393_bases
ATGTCAACTTTCGAGCGTCTTTCCGCCTATCGCCCCTATGGGCTGGCCGCTCTCAGAATCATCACCGCGCTGCTGTTCAT
CGAACACGGCACGATGAAGCTTTTCGGCTTCCCGGCTTCGCAGATGTCCGGCTCGCTGCCGCCGCTGATGCTGTTCGCGG
CTCTTCTTGAGCTTGTCGGCGGTATCCTCATTCTCATCGGCCTGCTGACGCGCCCCGTCGCCTTCCTGCTTGCCGGCGAA
ATGGCGGTCGCCTATTTCATGGCGCATGCCCCGAACAGCTTCTTCCCGGCCGTCAACCAGGGCGACGCCGCGATCCTGTT
CTGCTTCGTCTTCCTCTACCTGTTCTTCTCCGGTCCCGGCGCATTTTCCGTCGATAACCGCAAGGCAGCCTGA

Upstream 100 bases:

>100_bases
CTGCTGTCGAAAAAGTGAACGGCCGTCAGCGATCCGTGTGTTCAATCCCCGTCGGCGACGGGCTAACGCTCGGCTGCATT
GTTTTAAATGGAGAGGTTTT

Downstream 100 bases:

>100_bases
GCCGACACAGACTGCGGGGCATTTGCGATGCCCCGCAGCATTTTCTTCGTCAGGCCGTGAGTTTGAGGCCGGCGATGCCG
CCGACGATCAGCATGATGCA

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MSTFERLSAYRPYGLAALRIITALLFIEHGTMKLFGFPASQMSGSLPPLMLFAALLELVGGILILIGLLTRPVAFLLAGE
MAVAYFMAHAPNSFFPAVNQGDAAILFCFVFLYLFFSGPGAFSVDNRKAA

Sequences:

>Translated_130_residues
MSTFERLSAYRPYGLAALRIITALLFIEHGTMKLFGFPASQMSGSLPPLMLFAALLELVGGILILIGLLTRPVAFLLAGE
MAVAYFMAHAPNSFFPAVNQGDAAILFCFVFLYLFFSGPGAFSVDNRKAA
>Mature_129_residues
STFERLSAYRPYGLAALRIITALLFIEHGTMKLFGFPASQMSGSLPPLMLFAALLELVGGILILIGLLTRPVAFLLAGEM
AVAYFMAHAPNSFFPAVNQGDAAILFCFVFLYLFFSGPGAFSVDNRKAA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14045; Mature: 13914

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFERLSAYRPYGLAALRIITALLFIEHGTMKLFGFPASQMSGSLPPLMLFAALLELVG
CCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHH
GILILIGLLTRPVAFLLAGEMAVAYFMAHAPNSFFPAVNQGDAAILFCFVFLYLFFSGPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
AFSVDNRKAA
CCCCCCCCCC
>Mature Secondary Structure 
STFERLSAYRPYGLAALRIITALLFIEHGTMKLFGFPASQMSGSLPPLMLFAALLELVG
CHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHH
GILILIGLLTRPVAFLLAGEMAVAYFMAHAPNSFFPAVNQGDAAILFCFVFLYLFFSGPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
AFSVDNRKAA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]