| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is fbpB [H]
Identifier: 209549356
GI number: 209549356
Start: 1800384
End: 1802615
Strand: Reverse
Name: fbpB [H]
Synonym: Rleg2_1760
Alternate gene names: 209549356
Gene position: 1802615-1800384 (Counterclockwise)
Preceding gene: 209549357
Following gene: 209549355
Centisome position: 39.72
GC content: 61.38
Gene sequence:
>2232_bases ATGAGACGTGGCAATCGCCGATTGGACATCGTCCTTGGCCTGGGGGCGGCTGCCCTGATCATTGTCCCGTGGTATCGCAT CGAGGGCGGCTTCTTCGGATTCAAGTGGCTGTCTGCCTTCCCCTTCTCCGCCGATGCGGCGCCAGGCGTGCTGCAAATCC TGCAGCACGGAAGAAGTTGGCTTGCGGGCGTGGTCCTGCTCTTTCTGCTCTGCTGTTTGGCGCGTCTGGTGCGCGATCCG ATGCGGCGCGGAACCTTGCTCGCCTCGCTCGGTGCCGTCGGCCTCGTCTTCCTGTCTCTGCAGGGATTGGCGATCGGCTT TTCCGGTTGGACCTGGGCAATCAGTGAAAACCTGTTCGGCATGTTATCCGAGGGACAGCCATCGATGGGTGCCGGCGCGG TCCTCATAGCGCTGGTTTTCGTTCTTCTCTTTGCCTTCGGACTGGCCGAACGCGGGGTGATGAAGGGGGACGCCTTCATC GTCGGTTCGATTTGCATTCTTGCGTTTCTGGTCACCGTCTTCGTTTTCTATCCGATCGGCAGCATGTTCATCGCTTCGGT GCAGGACTTCGACGGCTCCTTCAATCCGGATGGTCTTATACGCAACATTCAGGACCCCGGCATTTGGAGCCTGGCCTGCA TAGCGGGCGAAGAACGTTGCGGCGTTGCCTGGCGCACGCTCCTTCTCGCCCTCATGACCGCTTCCGGCTCGACCCTGCTC GGCCTCGGCTTTGCGCTGGTGGCGACGCGCACGCGCTTTCCGTTCAAAAAGGGATTGCGCCTGCTGACGGTGCTGCCGAT CATTACACCGCCCTTCGTCATCGGCCTGGCGCTGACACTGCTGTTCGGCCGCGCCGGGATCATCACCGAGACATTGTCCA GCCTTTTGGGCATCGAGCCGGGCCGGTGGCTCTATGGGCTCACCGGCATTTGGATCGCCCAGGTTCTCTCCTTTACGCCG ATCGCCTTCCTCGTCCTCATCGGCGTCGTCGAAGGCGTCAGCCCCTCGATGGAGGAGGCATCGCAGACCCTGCGTGCCGG TCGCTGGCGCACGTTCTGGCGCGTCTCCCTGCCGCTGATGAAGCCAGGTCTCGCCAATGCCTTCCTGATCGGGTTCATCG AGAGCATGGCCGATTTCGGCAATCCGCTGGTGCTCGGCGGCACGCATGGCGTGCTTTCGACGGAAATCTTCTTTGCGGTC GTGGGCTCGCAGAACGATCCGTCGCGCGCCGCCGTTCTTGCCATCGTGCTCCTCTGCTTCACACTTTCGGCATTCCTTGC CCAGCGTCTTTGGCTATCGGGCAAGAGCTTTGCCACGGTCACCGGCAAGGGCGACAGCGGCGCCCATATCGCCTTGCCGC GCGGCCTTTCCATTGCCGCGCATGTGGTGGTCATTCCGTGGATGATTTTCACCGTCGTCGTTTATGGAATGATCCTGATC GGCGGTTTCGTGAAAACCTGGGGCCTCGACAACTCGTTGACGCTCGGCCACTACGTTCGCGCCTTCTCGATCGATTTCTC CAATGGCGGGATCGCTTGGACCGGCGTGGCGTGGAATTCCTTCTGGACGACGATGGAGATCGCGCTCGTCTCCGCGCCCT TGACCGCTGCGGTGGGCTTGCTCACAGCCTATATCATCGTACGGCAGAAATTCGTCGGGCGGAACGTCTTCGAATTCGCC CTGATGATGAGCTTCGCCATTCCCGGAACGGTCATCGGCGTCAGCTACATCATGGCTTTCAACCTGCCTCCGGTCGAGAT GACCGGCTCGGCGCTGATCCTCGTCCTGTGCTTCGTCTTCCGCAATATGCCGGTCGGCGTTCGCGGCGGCATCGCAGCGA TGAGCCAGCTCGACAAGAGCCTGGACGAAGCGTCGCTGACTTTGCGTGCGGACAGTTTCCGCACGATCCGCAAGGTGATC CTGCCCTTGCTGCGGCCAGCCATCACCGCTGCGCTGGTCTATTCCTTCGTTCGCGCCATAACCTCGATCAGCGCCGTCAT CTTCCTCGTCAGCGCGGAATACAACATGGCCACGTCCTATATCGTCGGCCTCGTCGAGAATGGCGAATACGGCGTGGCGA TCGCCTATTCATCCATGCTGATCGTGGTCATGAGCATTGTCATCGCCGGCTTCCAGCTCGTCGTCGGCGAGCGCCGTCTA CGCCGCGAAAATCGCGTCGCCGGCACCAGCCCAGCTCCCTCTGTTCCTCTCGGTCAGGAGAAAACCGCATGA
Upstream 100 bases:
>100_bases ATCGCCAACTGAAGATCGATGAGTGGCACGGCATCGCGGACGGTTCCGGGGTGCCGATCCATTCTCCCCTTTCATCAACG TGAAATAAGCGAGGTATGCC
Downstream 100 bases:
>100_bases TCACCGTCAAACCCGGTTCCGTCACCTTCCAGAACGTGCGCAAGTCTTTCGGTGCATTTACGGCCATCCCGGACCTTTCT CTCACCATCGAGCCTGGCAC
Product: binding-protein-dependent transporters inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MRRGNRRLDIVLGLGAAALIIVPWYRIEGGFFGFKWLSAFPFSADAAPGVLQILQHGRSWLAGVVLLFLLCCLARLVRDP MRRGTLLASLGAVGLVFLSLQGLAIGFSGWTWAISENLFGMLSEGQPSMGAGAVLIALVFVLLFAFGLAERGVMKGDAFI VGSICILAFLVTVFVFYPIGSMFIASVQDFDGSFNPDGLIRNIQDPGIWSLACIAGEERCGVAWRTLLLALMTASGSTLL GLGFALVATRTRFPFKKGLRLLTVLPIITPPFVIGLALTLLFGRAGIITETLSSLLGIEPGRWLYGLTGIWIAQVLSFTP IAFLVLIGVVEGVSPSMEEASQTLRAGRWRTFWRVSLPLMKPGLANAFLIGFIESMADFGNPLVLGGTHGVLSTEIFFAV VGSQNDPSRAAVLAIVLLCFTLSAFLAQRLWLSGKSFATVTGKGDSGAHIALPRGLSIAAHVVVIPWMIFTVVVYGMILI GGFVKTWGLDNSLTLGHYVRAFSIDFSNGGIAWTGVAWNSFWTTMEIALVSAPLTAAVGLLTAYIIVRQKFVGRNVFEFA LMMSFAIPGTVIGVSYIMAFNLPPVEMTGSALILVLCFVFRNMPVGVRGGIAAMSQLDKSLDEASLTLRADSFRTIRKVI LPLLRPAITAALVYSFVRAITSISAVIFLVSAEYNMATSYIVGLVENGEYGVAIAYSSMLIVVMSIVIAGFQLVVGERRL RRENRVAGTSPAPSVPLGQEKTA
Sequences:
>Translated_743_residues MRRGNRRLDIVLGLGAAALIIVPWYRIEGGFFGFKWLSAFPFSADAAPGVLQILQHGRSWLAGVVLLFLLCCLARLVRDP MRRGTLLASLGAVGLVFLSLQGLAIGFSGWTWAISENLFGMLSEGQPSMGAGAVLIALVFVLLFAFGLAERGVMKGDAFI VGSICILAFLVTVFVFYPIGSMFIASVQDFDGSFNPDGLIRNIQDPGIWSLACIAGEERCGVAWRTLLLALMTASGSTLL GLGFALVATRTRFPFKKGLRLLTVLPIITPPFVIGLALTLLFGRAGIITETLSSLLGIEPGRWLYGLTGIWIAQVLSFTP IAFLVLIGVVEGVSPSMEEASQTLRAGRWRTFWRVSLPLMKPGLANAFLIGFIESMADFGNPLVLGGTHGVLSTEIFFAV VGSQNDPSRAAVLAIVLLCFTLSAFLAQRLWLSGKSFATVTGKGDSGAHIALPRGLSIAAHVVVIPWMIFTVVVYGMILI GGFVKTWGLDNSLTLGHYVRAFSIDFSNGGIAWTGVAWNSFWTTMEIALVSAPLTAAVGLLTAYIIVRQKFVGRNVFEFA LMMSFAIPGTVIGVSYIMAFNLPPVEMTGSALILVLCFVFRNMPVGVRGGIAAMSQLDKSLDEASLTLRADSFRTIRKVI LPLLRPAITAALVYSFVRAITSISAVIFLVSAEYNMATSYIVGLVENGEYGVAIAYSSMLIVVMSIVIAGFQLVVGERRL RRENRVAGTSPAPSVPLGQEKTA >Mature_743_residues MRRGNRRLDIVLGLGAAALIIVPWYRIEGGFFGFKWLSAFPFSADAAPGVLQILQHGRSWLAGVVLLFLLCCLARLVRDP MRRGTLLASLGAVGLVFLSLQGLAIGFSGWTWAISENLFGMLSEGQPSMGAGAVLIALVFVLLFAFGLAERGVMKGDAFI VGSICILAFLVTVFVFYPIGSMFIASVQDFDGSFNPDGLIRNIQDPGIWSLACIAGEERCGVAWRTLLLALMTASGSTLL GLGFALVATRTRFPFKKGLRLLTVLPIITPPFVIGLALTLLFGRAGIITETLSSLLGIEPGRWLYGLTGIWIAQVLSFTP IAFLVLIGVVEGVSPSMEEASQTLRAGRWRTFWRVSLPLMKPGLANAFLIGFIESMADFGNPLVLGGTHGVLSTEIFFAV VGSQNDPSRAAVLAIVLLCFTLSAFLAQRLWLSGKSFATVTGKGDSGAHIALPRGLSIAAHVVVIPWMIFTVVVYGMILI GGFVKTWGLDNSLTLGHYVRAFSIDFSNGGIAWTGVAWNSFWTTMEIALVSAPLTAAVGLLTAYIIVRQKFVGRNVFEFA LMMSFAIPGTVIGVSYIMAFNLPPVEMTGSALILVLCFVFRNMPVGVRGGIAAMSQLDKSLDEASLTLRADSFRTIRKVI LPLLRPAITAALVYSFVRAITSISAVIFLVSAEYNMATSYIVGLVENGEYGVAIAYSSMLIVVMSIVIAGFQLVVGERRL RRENRVAGTSPAPSVPLGQEKTA
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=198, Percent_Identity=30.3030303030303, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1786254, Length=209, Percent_Identity=28.2296650717703, Blast_Score=63, Evalue=7e-11, Organism=Escherichia coli, GI1786980, Length=219, Percent_Identity=31.0502283105023, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 79713; Mature: 79713
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGNRRLDIVLGLGAAALIIVPWYRIEGGFFGFKWLSAFPFSADAAPGVLQILQHGRSW CCCCCCEEEEEEECCCEEEHEEEHEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHCHHH LAGVVLLFLLCCLARLVRDPMRRGTLLASLGAVGLVFLSLQGLAIGFSGWTWAISENLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEHHHHHH MLSEGQPSMGAGAVLIALVFVLLFAFGLAERGVMKGDAFIVGSICILAFLVTVFVFYPIG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SMFIASVQDFDGSFNPDGLIRNIQDPGIWSLACIAGEERCGVAWRTLLLALMTASGSTLL HHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHH GLGFALVATRTRFPFKKGLRLLTVLPIITPPFVIGLALTLLFGRAGIITETLSSLLGIEP HHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC GRWLYGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSMEEASQTLRAGRWRTFWRVSLPLM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCC KPGLANAFLIGFIESMADFGNPLVLGGTHGVLSTEIFFAVVGSQNDPSRAAVLAIVLLCF CCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHEEHEEEECCCCCCHHHHHHHHHHHHH TLSAFLAQRLWLSGKSFATVTGKGDSGAHIALPRGLSIAAHVVVIPWMIFTVVVYGMILI HHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH GGFVKTWGLDNSLTLGHYVRAFSIDFSNGGIAWTGVAWNSFWTTMEIALVSAPLTAAVGL HHHHHHCCCCCCCCHHHEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHH LTAYIIVRQKFVGRNVFEFALMMSFAIPGTVIGVSYIMAFNLPPVEMTGSALILVLCFVF HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RNMPVGVRGGIAAMSQLDKSLDEASLTLRADSFRTIRKVILPLLRPAITAALVYSFVRAI CCCCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSISAVIFLVSAEYNMATSYIVGLVENGEYGVAIAYSSMLIVVMSIVIAGFQLVVGERRL HHHHHHHHHEECCCCHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RRENRVAGTSPAPSVPLGQEKTA HHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRGNRRLDIVLGLGAAALIIVPWYRIEGGFFGFKWLSAFPFSADAAPGVLQILQHGRSW CCCCCCEEEEEEECCCEEEHEEEHEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHCHHH LAGVVLLFLLCCLARLVRDPMRRGTLLASLGAVGLVFLSLQGLAIGFSGWTWAISENLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEHHHHHH MLSEGQPSMGAGAVLIALVFVLLFAFGLAERGVMKGDAFIVGSICILAFLVTVFVFYPIG HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SMFIASVQDFDGSFNPDGLIRNIQDPGIWSLACIAGEERCGVAWRTLLLALMTASGSTLL HHHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHH GLGFALVATRTRFPFKKGLRLLTVLPIITPPFVIGLALTLLFGRAGIITETLSSLLGIEP HHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC GRWLYGLTGIWIAQVLSFTPIAFLVLIGVVEGVSPSMEEASQTLRAGRWRTFWRVSLPLM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCC KPGLANAFLIGFIESMADFGNPLVLGGTHGVLSTEIFFAVVGSQNDPSRAAVLAIVLLCF CCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHEEHEEEECCCCCCHHHHHHHHHHHHH TLSAFLAQRLWLSGKSFATVTGKGDSGAHIALPRGLSIAAHVVVIPWMIFTVVVYGMILI HHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH GGFVKTWGLDNSLTLGHYVRAFSIDFSNGGIAWTGVAWNSFWTTMEIALVSAPLTAAVGL HHHHHHCCCCCCCCHHHEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHH LTAYIIVRQKFVGRNVFEFALMMSFAIPGTVIGVSYIMAFNLPPVEMTGSALILVLCFVF HHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RNMPVGVRGGIAAMSQLDKSLDEASLTLRADSFRTIRKVILPLLRPAITAALVYSFVRAI CCCCCCCCHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSISAVIFLVSAEYNMATSYIVGLVENGEYGVAIAYSSMLIVVMSIVIAGFQLVVGERRL HHHHHHHHHEECCCCHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RRENRVAGTSPAPSVPLGQEKTA HHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]