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The map label for this gene is ycaK [C]

Identifier: 209549270

GI number: 209549270

Start: 1702849

End: 1703430

Strand: Reverse

Name: ycaK [C]

Synonym: Rleg2_1673

Alternate gene names: 209549270

Gene position: 1703430-1702849 (Counterclockwise)

Preceding gene: 209549271

Following gene: 209549269

Centisome position: 37.54

GC content: 60.31

Gene sequence:

>582_bases
ATGAGAGTTCTCGTGCTTCATTCGCATCCGGTCGAGGAAAGCTACGGCAAAGCGCTCTACAAACAGACGCTGGAAAGCCT
GCGAGAGGCCGGTCACGCGGTGGATGCGTGCGATCTCTATGCCGAGAATTTCGATCCGGTGCTCTCCCGACACGACCGGC
TCGCCTATCACGATTATCCCGGCAATACCGCGCTGGTGAAACCCTATGTCGAGCGGCTGAAGCAGGCCGAAGCGCTGGTG
CTGGTGACGCCGATCTGGAATTTCGGTTTCCCGGCGATCCTGAAGGGCTATTTTGACCGCGTCTGGCTTCCCGGCGTCTC
CTTCGAACTGGTCGACGGCAAGGTGGAATCGCGGCTGCGCCACATCAGGAAACTCGCGGCCGTGCTGACATATGGCGCCA
CGCCGTTTCGCGCCTTCGTCGCCGGCAACCCGCCGAAGAAGATCGTCAAGCGTGTGCTGAGGGCGCAGATCAATCCGCTG
CGGCCGGTCACCTTACTTGCCCATTACGACATGAACAACTGCACGCCGGAAAGCCGGGCCAGGTTTTTGGCGAAGGTGAA
GACGGCGATGGAGCGGTTTTGA

Upstream 100 bases:

>100_bases
TGAACCCCGGCAAGATGATCGCCTGGGAAAATCCCGATTTCGATTTCAACGCCGGCGAGAATTATCTCTTCCCGGGGCTT
GCGAGCGTCATGGAGGCCTG

Downstream 100 bases:

>100_bases
GAGCCCGCATCTTCCTCGTTGCTACCCTAGGAAAGGCCTATGAAGACGATTTTCAATCCCCCGTCCGTCCGCCGCCCGTT
CGGAAATTACAATCACGGGC

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRVLVLHSHPVEESYGKALYKQTLESLREAGHAVDACDLYAENFDPVLSRHDRLAYHDYPGNTALVKPYVERLKQAEALV
LVTPIWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLRHIRKLAAVLTYGATPFRAFVAGNPPKKIVKRVLRAQINPL
RPVTLLAHYDMNNCTPESRARFLAKVKTAMERF

Sequences:

>Translated_193_residues
MRVLVLHSHPVEESYGKALYKQTLESLREAGHAVDACDLYAENFDPVLSRHDRLAYHDYPGNTALVKPYVERLKQAEALV
LVTPIWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLRHIRKLAAVLTYGATPFRAFVAGNPPKKIVKRVLRAQINPL
RPVTLLAHYDMNNCTPESRARFLAKVKTAMERF
>Mature_193_residues
MRVLVLHSHPVEESYGKALYKQTLESLREAGHAVDACDLYAENFDPVLSRHDRLAYHDYPGNTALVKPYVERLKQAEALV
LVTPIWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLRHIRKLAAVLTYGATPFRAFVAGNPPKKIVKRVLRAQINPL
RPVTLLAHYDMNNCTPESRARFLAKVKTAMERF

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 21973; Mature: 21973

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLVLHSHPVEESYGKALYKQTLESLREAGHAVDACDLYAENFDPVLSRHDRLAYHDYP
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCEEECCC
GNTALVKPYVERLKQAEALVLVTPIWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLR
CCCHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
HIRKLAAVLTYGATPFRAFVAGNPPKKIVKRVLRAQINPLRPVTLLAHYDMNNCTPESRA
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH
RFLAKVKTAMERF
HHHHHHHHHHHCC
>Mature Secondary Structure
MRVLVLHSHPVEESYGKALYKQTLESLREAGHAVDACDLYAENFDPVLSRHDRLAYHDYP
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCEEECCC
GNTALVKPYVERLKQAEALVLVTPIWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLR
CCCHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
HIRKLAAVLTYGATPFRAFVAGNPPKKIVKRVLRAQINPLRPVTLLAHYDMNNCTPESRA
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH
RFLAKVKTAMERF
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]