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The map label for this gene is tdcF [C]

Identifier: 209549269

GI number: 209549269

Start: 1702417

End: 1702809

Strand: Reverse

Name: tdcF [C]

Synonym: Rleg2_1672

Alternate gene names: 209549269

Gene position: 1702809-1702417 (Counterclockwise)

Preceding gene: 209549270

Following gene: 209549261

Centisome position: 37.52

GC content: 59.29

Gene sequence:

>393_bases
ATGAAGACGATTTTCAATCCCCCGTCCGTCCGCCGCCCGTTCGGAAATTACAATCACGGGCTGCTGGTGCCGGCGGGCGC
CTCGCTGCTCGTGACCTCGGGGCAGCTCGGCATCGGTCTCGACGAGAAAGTGCCGGAGGATACCGGCGCTCAGGCAGAAC
TTTGCTTCGAGGCCATCAAGGCAATTCTCGCAGAGGCGGAAATGAGTTTTGCCGACGTCATCCGCATCTCAGGGTTTGTG
ACGAAGCGCGAGGATTTCCCTGCCTATATGGCCATGCGAGATCGCTATACGCTCGATCCGAAGCCGGCCTCGACGCTGAT
CATCGTCAGCGGCTTCACCCGCCCCGAATTCCTTGTGGAAGTCGAAGTCACGGCCGCCAAACTGTTTTGTTGA

Upstream 100 bases:

>100_bases
CACGCCGGAAAGCCGGGCCAGGTTTTTGGCGAAGGTGAAGACGGCGATGGAGCGGTTTTGAGAGCCCGCATCTTCCTCGT
TGCTACCCTAGGAAAGGCCT

Downstream 100 bases:

>100_bases
AGCGAGCCTGGGGAAGCGCCCTCGTCAGCAGCCCTGCCCTTGGATTCTCCCACGCCGCCGCCGGTATCACCGCCGATATC
CTCTGCAAACTTGCGCATCA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease L-PSP Family Protein; Threonine Degradation Protein; L-PSP Family Endoribonuclease

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKTIFNPPSVRRPFGNYNHGLLVPAGASLLVTSGQLGIGLDEKVPEDTGAQAELCFEAIKAILAEAEMSFADVIRISGFV
TKREDFPAYMAMRDRYTLDPKPASTLIIVSGFTRPEFLVEVEVTAAKLFC

Sequences:

>Translated_130_residues
MKTIFNPPSVRRPFGNYNHGLLVPAGASLLVTSGQLGIGLDEKVPEDTGAQAELCFEAIKAILAEAEMSFADVIRISGFV
TKREDFPAYMAMRDRYTLDPKPASTLIIVSGFTRPEFLVEVEVTAAKLFC
>Mature_130_residues
MKTIFNPPSVRRPFGNYNHGLLVPAGASLLVTSGQLGIGLDEKVPEDTGAQAELCFEAIKAILAEAEMSFADVIRISGFV
TKREDFPAYMAMRDRYTLDPKPASTLIIVSGFTRPEFLVEVEVTAAKLFC

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14199; Mature: 14199

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIFNPPSVRRPFGNYNHGLLVPAGASLLVTSGQLGIGLDEKVPEDTGAQAELCFEAIK
CCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AILAEAEMSFADVIRISGFVTKREDFPAYMAMRDRYTLDPKPASTLIIVSGFTRPEFLVE
HHHHHHCCCHHHHHHHHCEEECCCCCCCEEHHCCCCCCCCCCCCEEEEEECCCCCEEEEE
VEVTAAKLFC
EEEEEEEECC
>Mature Secondary Structure
MKTIFNPPSVRRPFGNYNHGLLVPAGASLLVTSGQLGIGLDEKVPEDTGAQAELCFEAIK
CCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AILAEAEMSFADVIRISGFVTKREDFPAYMAMRDRYTLDPKPASTLIIVSGFTRPEFLVE
HHHHHHCCCHHHHHHHHCEEECCCCCCCEEHHCCCCCCCCCCCCEEEEEECCCCCEEEEE
VEVTAAKLFC
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA