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The map label for this gene is ygaD [C]

Identifier: 209549214

GI number: 209549214

Start: 1640409

End: 1640909

Strand: Reverse

Name: ygaD [C]

Synonym: Rleg2_1615

Alternate gene names: 209549214

Gene position: 1640909-1640409 (Counterclockwise)

Preceding gene: 209549215

Following gene: 209549197

Centisome position: 36.16

GC content: 64.87

Gene sequence:

>501_bases
ATGAGCCTTTTTCCCGAGGATATCCTTTCGGCGGCGCAGACGATCATCCGCGACTTCACGGGCGCCGGGCTGATGATTTC
GACCGCCGAATCCTGCACCGGCGGGCTGATATCAGGCGCGCTGACCGAAATATCCGGCTCATCGGCCGTCGTCGACCGCG
GCTTCGTTACCTATACGAATACGGCAAAGATCGAGCTGCTTGGCGTACAGGAGGCAACGCTGCTGCGCTTCGGGGCGGTC
TCCGAGGAAACGGCGCGGCAGATGGTGCATGGCGCCCTCTTCCGCTCACGCGCCGCGATCGCCGTCGCCGTCACCGGCAT
TGCCGGCCCCGGCGGCGGATCGGCGGAAAAACCGGTCGGCCTCGTGCATCTCGCCGCCAAGTCACGCAGCGGTGTGCTCA
TTCACCGGAAGATGTCTTACGGCGATATCGGCCGCAGCGAGGTTCGGCTGGCAACGATCCGGACGGCGCTGGAGATGATA
CGTTCGCTGCTCGCCGGCTGA

Upstream 100 bases:

>100_bases
CGGTCAAGGCGACGACCAACGAGACCATCGGCTTCGTCGGCCGGCGCGAAGGCATCGCGGCAATCGCCACGGCGACCGTC
GTCTATCGCGGGGTGAAACG

Downstream 100 bases:

>100_bases
CGGGCGCCGGCAATCGACGCGTCAGGCAGGCGCGTAGATCCTGCTGGCGCGCGTTTCGAAGGCTTCGGTGAACATGCGGA
AGGCGCGGTCGAACATCGAG

Product: damage inducible protein CinA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSLFPEDILSAAQTIIRDFTGAGLMISTAESCTGGLISGALTEISGSSAVVDRGFVTYTNTAKIELLGVQEATLLRFGAV
SEETARQMVHGALFRSRAAIAVAVTGIAGPGGGSAEKPVGLVHLAAKSRSGVLIHRKMSYGDIGRSEVRLATIRTALEMI
RSLLAG

Sequences:

>Translated_166_residues
MSLFPEDILSAAQTIIRDFTGAGLMISTAESCTGGLISGALTEISGSSAVVDRGFVTYTNTAKIELLGVQEATLLRFGAV
SEETARQMVHGALFRSRAAIAVAVTGIAGPGGGSAEKPVGLVHLAAKSRSGVLIHRKMSYGDIGRSEVRLATIRTALEMI
RSLLAG
>Mature_165_residues
SLFPEDILSAAQTIIRDFTGAGLMISTAESCTGGLISGALTEISGSSAVVDRGFVTYTNTAKIELLGVQEATLLRFGAVS
EETARQMVHGALFRSRAAIAVAVTGIAGPGGGSAEKPVGLVHLAAKSRSGVLIHRKMSYGDIGRSEVRLATIRTALEMIR
SLLAG

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=139, Percent_Identity=48.2014388489209, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1787818, Length=121, Percent_Identity=40.495867768595, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 17176; Mature: 17045

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFPEDILSAAQTIIRDFTGAGLMISTAESCTGGLISGALTEISGSSAVVDRGFVTYTN
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHCCHHHHHHHHHCCCCCEEEECCEEEEEC
TAKIELLGVQEATLLRFGAVSEETARQMVHGALFRSRAAIAVAVTGIAGPGGGSAEKPVG
CCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEE
LVHLAAKSRSGVLIHRKMSYGDIGRSEVRLATIRTALEMIRSLLAG
EEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLFPEDILSAAQTIIRDFTGAGLMISTAESCTGGLISGALTEISGSSAVVDRGFVTYTN
CCCHHHHHHHHHHHHHHHCCCCEEEECCCHHCCHHHHHHHHHCCCCCEEEECCEEEEEC
TAKIELLGVQEATLLRFGAVSEETARQMVHGALFRSRAAIAVAVTGIAGPGGGSAEKPVG
CCEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEE
LVHLAAKSRSGVLIHRKMSYGDIGRSEVRLATIRTALEMIRSLLAG
EEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA