| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ycbK [C]
Identifier: 209549147
GI number: 209549147
Start: 1574562
End: 1575605
Strand: Reverse
Name: ycbK [C]
Synonym: Rleg2_1548
Alternate gene names: 209549147
Gene position: 1575605-1574562 (Counterclockwise)
Preceding gene: 209549148
Following gene: 209549141
Centisome position: 34.72
GC content: 65.61
Gene sequence:
>1044_bases ATGCCCCTGATGGGCGCTTTGCTGATCGCCACTTCGGTGCTGGCGCTGTCCGGCTGCGCGTCGGACAAGAAGGCACTCGA TTCCGCCGTAGCCGTTCCGGCACCGCAGGCAGCCGCACCGCAACTTGCCGCGGCAGCACCCGCAAGCCCTGCCCCACGTT CGGTCTACACGGATCCCCGGCTCGTCAATGTCTCCGGCGCCCAAGCCGCGCCCCAGGCCGCGGGAGCAGATCCGAATGCG CCCGTCCCGCCCGCCGATCCGGCGGCGGCAGCGCCTGCCAATATCGGCGGGCTGGTGCTGCAGTCGACCCGGATCAACGC GCAGGCCATGAGCATCTTTTCCGACCACCAGCCGGCGCCGCAGAACAACAGCACGTCGACGGTCATTCAGCCGCAGGCCT ATGCGCCTGTCGGTGCAGCACCCGCGAGAAGCAGCGTCTACAGCCAGCAACCGGGAACAGAACCGCCTGCGGAGCCGGTG CTGCCGCAGCAATCCTCGCAGAATGGCAGCACACAGCTTGCGCCCGTCCAAACGGCGTCGCTGGCAGCAGACGGCAATCC GGCCCCAACGATGAACGCGCTCTACAGCGCGCCGAAGCAGAACCTGCTCGGCAGCCTCACCGGCCTGTTGCAAAAAGCGT CGCTGCCCGGCATGACGCGGATCGCGCCGAACGGGCTGCATGTCCAGAACGACAAGGTCGAGGTCGGCTGCTTCAAACCC GAGCTGCTGAACGTGATCAAGACTGTGGAAAGCCATTTCGGCCGGCCTGTTATCGTCACGTCAGGCTATCGCGACGAAGA GCATAACCGCCTGGTCGGCGGCGCCGACGAATCGATGCACAAAAGCTGCGAGGCGGCCGACATCCAGATCGACGGCGTCA CAAAATGGGATATCGCCGCCTATATCCGCTCACTGCCGAACCGCGGCGGCGTCGGCACATATTGCCACACGGATTCGGTC CATCTCGATACCGGCAAAAGTCGCGACTGGAACTGGGGCTGCGGCGGCAAACGCGCGCCTATGGCGACCGCAAGAGCGAT CTGA
Upstream 100 bases:
>100_bases CCTGCAGGCAATCTCCTGGCGACTCGACGCGGAAGATGGCGGTTTTCGACCATTTTCCGCATCAACTGGAGACTGTCGCT TGCGTAACATTGAGATGCGG
Downstream 100 bases:
>100_bases CGGCCGCGCGTTTTTCGCATGACGTTACGGAAGCGCCGCCTCGTCTTGTTAAAGAGATAGCCGGCAGCCCGTTGATTCAG CTTCAATAATAAGCTCCGCG
Product: peptidase M15A
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MPLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPRLVNVSGAQAAPQAAGADPNA PVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAPQNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPV LPQQSSQNGSTQLAPVQTASLAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAAYIRSLPNRGGVGTYCHTDSV HLDTGKSRDWNWGCGGKRAPMATARAI
Sequences:
>Translated_347_residues MPLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPRLVNVSGAQAAPQAAGADPNA PVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAPQNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPV LPQQSSQNGSTQLAPVQTASLAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAAYIRSLPNRGGVGTYCHTDSV HLDTGKSRDWNWGCGGKRAPMATARAI >Mature_346_residues PLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPRLVNVSGAQAAPQAAGADPNAP VPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAPQNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPVL PQQSSQNGSTQLAPVQTASLAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKPE LLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAAYIRSLPNRGGVGTYCHTDSVH LDTGKSRDWNWGCGGKRAPMATARAI
Specific function: Unknown
COG id: COG3108
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35643; Mature: 35512
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPR CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE LVNVSGAQAAPQAAGADPNAPVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAP EEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCC QNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPVLPQQSSQNGSTQLAPVQTAS CCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHHH LAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEECCH ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAA HHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCHHHHHCCCCCEEEECCCCHHHHHH YIRSLPNRGGVGTYCHTDSVHLDTGKSRDWNWGCGGKRAPMATARAI HHHHCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure PLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPR CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE LVNVSGAQAAPQAAGADPNAPVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAP EEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCC QNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPVLPQQSSQNGSTQLAPVQTAS CCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHHH LAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEECCH ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAA HHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCHHHHHCCCCCEEEECCCCHHHHHH YIRSLPNRGGVGTYCHTDSVHLDTGKSRDWNWGCGGKRAPMATARAI HHHHCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA