Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is ycbK [C]

Identifier: 209549147

GI number: 209549147

Start: 1574562

End: 1575605

Strand: Reverse

Name: ycbK [C]

Synonym: Rleg2_1548

Alternate gene names: 209549147

Gene position: 1575605-1574562 (Counterclockwise)

Preceding gene: 209549148

Following gene: 209549141

Centisome position: 34.72

GC content: 65.61

Gene sequence:

>1044_bases
ATGCCCCTGATGGGCGCTTTGCTGATCGCCACTTCGGTGCTGGCGCTGTCCGGCTGCGCGTCGGACAAGAAGGCACTCGA
TTCCGCCGTAGCCGTTCCGGCACCGCAGGCAGCCGCACCGCAACTTGCCGCGGCAGCACCCGCAAGCCCTGCCCCACGTT
CGGTCTACACGGATCCCCGGCTCGTCAATGTCTCCGGCGCCCAAGCCGCGCCCCAGGCCGCGGGAGCAGATCCGAATGCG
CCCGTCCCGCCCGCCGATCCGGCGGCGGCAGCGCCTGCCAATATCGGCGGGCTGGTGCTGCAGTCGACCCGGATCAACGC
GCAGGCCATGAGCATCTTTTCCGACCACCAGCCGGCGCCGCAGAACAACAGCACGTCGACGGTCATTCAGCCGCAGGCCT
ATGCGCCTGTCGGTGCAGCACCCGCGAGAAGCAGCGTCTACAGCCAGCAACCGGGAACAGAACCGCCTGCGGAGCCGGTG
CTGCCGCAGCAATCCTCGCAGAATGGCAGCACACAGCTTGCGCCCGTCCAAACGGCGTCGCTGGCAGCAGACGGCAATCC
GGCCCCAACGATGAACGCGCTCTACAGCGCGCCGAAGCAGAACCTGCTCGGCAGCCTCACCGGCCTGTTGCAAAAAGCGT
CGCTGCCCGGCATGACGCGGATCGCGCCGAACGGGCTGCATGTCCAGAACGACAAGGTCGAGGTCGGCTGCTTCAAACCC
GAGCTGCTGAACGTGATCAAGACTGTGGAAAGCCATTTCGGCCGGCCTGTTATCGTCACGTCAGGCTATCGCGACGAAGA
GCATAACCGCCTGGTCGGCGGCGCCGACGAATCGATGCACAAAAGCTGCGAGGCGGCCGACATCCAGATCGACGGCGTCA
CAAAATGGGATATCGCCGCCTATATCCGCTCACTGCCGAACCGCGGCGGCGTCGGCACATATTGCCACACGGATTCGGTC
CATCTCGATACCGGCAAAAGTCGCGACTGGAACTGGGGCTGCGGCGGCAAACGCGCGCCTATGGCGACCGCAAGAGCGAT
CTGA

Upstream 100 bases:

>100_bases
CCTGCAGGCAATCTCCTGGCGACTCGACGCGGAAGATGGCGGTTTTCGACCATTTTCCGCATCAACTGGAGACTGTCGCT
TGCGTAACATTGAGATGCGG

Downstream 100 bases:

>100_bases
CGGCCGCGCGTTTTTCGCATGACGTTACGGAAGCGCCGCCTCGTCTTGTTAAAGAGATAGCCGGCAGCCCGTTGATTCAG
CTTCAATAATAAGCTCCGCG

Product: peptidase M15A

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPRLVNVSGAQAAPQAAGADPNA
PVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAPQNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPV
LPQQSSQNGSTQLAPVQTASLAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP
ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAAYIRSLPNRGGVGTYCHTDSV
HLDTGKSRDWNWGCGGKRAPMATARAI

Sequences:

>Translated_347_residues
MPLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPRLVNVSGAQAAPQAAGADPNA
PVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAPQNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPV
LPQQSSQNGSTQLAPVQTASLAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP
ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAAYIRSLPNRGGVGTYCHTDSV
HLDTGKSRDWNWGCGGKRAPMATARAI
>Mature_346_residues
PLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPRLVNVSGAQAAPQAAGADPNAP
VPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAPQNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPVL
PQQSSQNGSTQLAPVQTASLAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKPE
LLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAAYIRSLPNRGGVGTYCHTDSVH
LDTGKSRDWNWGCGGKRAPMATARAI

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35643; Mature: 35512

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPR
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE
LVNVSGAQAAPQAAGADPNAPVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAP
EEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCC
QNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPVLPQQSSQNGSTQLAPVQTAS
CCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHHH
LAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEECCH
ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAA
HHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCHHHHHCCCCCEEEECCCCHHHHHH
YIRSLPNRGGVGTYCHTDSVHLDTGKSRDWNWGCGGKRAPMATARAI
HHHHCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
PLMGALLIATSVLALSGCASDKKALDSAVAVPAPQAAAPQLAAAAPASPAPRSVYTDPR
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCE
LVNVSGAQAAPQAAGADPNAPVPPADPAAAAPANIGGLVLQSTRINAQAMSIFSDHQPAP
EEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCC
QNNSTSTVIQPQAYAPVGAAPARSSVYSQQPGTEPPAEPVLPQQSSQNGSTQLAPVQTAS
CCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCEEHHH
LAADGNPAPTMNALYSAPKQNLLGSLTGLLQKASLPGMTRIAPNGLHVQNDKVEVGCFKP
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEECCH
ELLNVIKTVESHFGRPVIVTSGYRDEEHNRLVGGADESMHKSCEAADIQIDGVTKWDIAA
HHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCHHHHHCCCCCEEEECCCCHHHHHH
YIRSLPNRGGVGTYCHTDSVHLDTGKSRDWNWGCGGKRAPMATARAI
HHHHCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA