| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549140
Identifier: 209549140
GI number: 209549140
Start: 1564537
End: 1565877
Strand: Reverse
Name: 209549140
Synonym: Rleg2_1541
Alternate gene names: NA
Gene position: 1565877-1564537 (Counterclockwise)
Preceding gene: 209549141
Following gene: 209549138
Centisome position: 34.51
GC content: 64.5
Gene sequence:
>1341_bases ATGGCGTTTGCGGTCGGGACGTTCGATGACGTCACCCCTCTTGGCGGATCTGCTTTTCGTTTGCGCAGATCTCGTGGCTT TCTTTACGGCGTCGTCGGCGCCGGATTTCTGACCTCAACATGGCTGATTACGACCTTGGCGACGATGCATTCGGTTGCCG CGCCCGTTTCGCCGCCCGAAAGATTCACCCAGGTCGCATTGGCGCCGAAACCCAAGCCGGCGACGCACGAACGGCTGATC CATGTCGGCAAGGCCGATCGGCTGGCCGCCTTCGACGCCAAGCCGGTCGTCGCCCTGACGGCCGACCTCGTCCAAGCGCA TGCGCAGAAGACCAGTGCAGCCGCAACGGCATTGGCAGCACTTACAAAACACAATCGGCTTGTCATGGCTGCCGAGCAGC CCGTGGTAGCCGCGATTTCCGAAAGCGCCAAATTCCGCAAGGATGATGTGGTCACGCCGCCGGCCGTCGAGGTTGCCTCG GCAGAGACAGTAGAAGAAGACGACAGCGACCGGATCGTCGTTCCCTCGAAGGAGGCGGTCGCCGCTGCCGAACTCCCGGC CCTGCTGGCGCTTGCCGATGCCGGACCGCAGCAGATTGCGCCGGCCCCGGTCGAGCCGCCCGCGCCCGCCCTCAAGACAG CGTCGCTGCCGCAGGAAAAATCTGCGCCGGTAGAAATTGCCGCGGCCGAAGACCAACAGCCTTTCGATCTCGTTCTGGCG CCGGATGCCGGTTCCGTGCCGCTGCCGATGGCGCGTCCCGACGGCCTTATCGGCAAGCCGGCACCGGCCGCCAAGGGGTC GCAGCGCGCCGGCGAGCCCGCCCTTGCCTATGCCCAGCCGAACTCGCCGATCGAGGACGACCAGGACGACGCAGTGCCGC GCTACGACAAGCCTGTCTTCTCGCCGAAACTGCGCGCCGGCGTCGCCATCTACGACATCGAAAACAGCACGGTCTATCTG CCGAACGGCGAGAGGCTGGAAGCTCATTCCGGTCTCGGCAAGATGCGCGACAACCCGCGTTACGTCGACAAGAAGATGCG CGGGCCGACGCCGCCGCATACCTACGCCCTCACCATACGCGAAAGCCTTTTCCATGGTGTCGAGGCGTTGCGGCTGACGC CGCTCCAGGGCTCGGACGCCATCTATGACCGTGTCGGCCTGCTCGCCCACACCTACATGCTCGGCAAGAACGGCGATTCC AACGGCTGCGTCTCCTTCAAGGACTACAAGCGCTTCCTCGCGGCCTATAAGCGCGGCGACATCAGGCAGCTCGTGGTCGT GCCGCGGCTGAACAACAAGCCGTCTTCGACGCTCGCCTCGCTGTTTTCATCGCGCAGTTAA
Upstream 100 bases:
>100_bases GTGGTCTAAATTCGGCCCATTTGCGCCATTACCGGCCCCGGCGAAGTGTAGTCAGTCAGTGCCGCCGGCCTGCGTAGCGA GTTTGAAAGACGAGTTCAGT
Downstream 100 bases:
>100_bases GCGATAGGAGAGCAGGCAGCCGCTGGCCTGCCTGCGCTACTTCAACCAGGCTGCGATTCGCTCTACCGCCTCGGCGATCT CGGCTTGCGAGCCCGCATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MAFAVGTFDDVTPLGGSAFRLRRSRGFLYGVVGAGFLTSTWLITTLATMHSVAAPVSPPERFTQVALAPKPKPATHERLI HVGKADRLAAFDAKPVVALTADLVQAHAQKTSAAATALAALTKHNRLVMAAEQPVVAAISESAKFRKDDVVTPPAVEVAS AETVEEDDSDRIVVPSKEAVAAAELPALLALADAGPQQIAPAPVEPPAPALKTASLPQEKSAPVEIAAAEDQQPFDLVLA PDAGSVPLPMARPDGLIGKPAPAAKGSQRAGEPALAYAQPNSPIEDDQDDAVPRYDKPVFSPKLRAGVAIYDIENSTVYL PNGERLEAHSGLGKMRDNPRYVDKKMRGPTPPHTYALTIRESLFHGVEALRLTPLQGSDAIYDRVGLLAHTYMLGKNGDS NGCVSFKDYKRFLAAYKRGDIRQLVVVPRLNNKPSSTLASLFSSRS
Sequences:
>Translated_446_residues MAFAVGTFDDVTPLGGSAFRLRRSRGFLYGVVGAGFLTSTWLITTLATMHSVAAPVSPPERFTQVALAPKPKPATHERLI HVGKADRLAAFDAKPVVALTADLVQAHAQKTSAAATALAALTKHNRLVMAAEQPVVAAISESAKFRKDDVVTPPAVEVAS AETVEEDDSDRIVVPSKEAVAAAELPALLALADAGPQQIAPAPVEPPAPALKTASLPQEKSAPVEIAAAEDQQPFDLVLA PDAGSVPLPMARPDGLIGKPAPAAKGSQRAGEPALAYAQPNSPIEDDQDDAVPRYDKPVFSPKLRAGVAIYDIENSTVYL PNGERLEAHSGLGKMRDNPRYVDKKMRGPTPPHTYALTIRESLFHGVEALRLTPLQGSDAIYDRVGLLAHTYMLGKNGDS NGCVSFKDYKRFLAAYKRGDIRQLVVVPRLNNKPSSTLASLFSSRS >Mature_445_residues AFAVGTFDDVTPLGGSAFRLRRSRGFLYGVVGAGFLTSTWLITTLATMHSVAAPVSPPERFTQVALAPKPKPATHERLIH VGKADRLAAFDAKPVVALTADLVQAHAQKTSAAATALAALTKHNRLVMAAEQPVVAAISESAKFRKDDVVTPPAVEVASA ETVEEDDSDRIVVPSKEAVAAAELPALLALADAGPQQIAPAPVEPPAPALKTASLPQEKSAPVEIAAAEDQQPFDLVLAP DAGSVPLPMARPDGLIGKPAPAAKGSQRAGEPALAYAQPNSPIEDDQDDAVPRYDKPVFSPKLRAGVAIYDIENSTVYLP NGERLEAHSGLGKMRDNPRYVDKKMRGPTPPHTYALTIRESLFHGVEALRLTPLQGSDAIYDRVGLLAHTYMLGKNGDSN GCVSFKDYKRFLAAYKRGDIRQLVVVPRLNNKPSSTLASLFSSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47359; Mature: 47228
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFAVGTFDDVTPLGGSAFRLRRSRGFLYGVVGAGFLTSTWLITTLATMHSVAAPVSPPE CEEEECCCCCCCCCCCHHHEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHH RFTQVALAPKPKPATHERLIHVGKADRLAAFDAKPVVALTADLVQAHAQKTSAAATALAA HHHEEEECCCCCCCHHHHHEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTKHNRLVMAAEQPVVAAISESAKFRKDDVVTPPAVEVASAETVEEDDSDRIVVPSKEAV HHHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHH AAAELPALLALADAGPQQIAPAPVEPPAPALKTASLPQEKSAPVEIAAAEDQQPFDLVLA HHHHHHHHEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEC PDAGSVPLPMARPDGLIGKPAPAAKGSQRAGEPALAYAQPNSPIEDDQDDAVPRYDKPVF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC SPKLRAGVAIYDIENSTVYLPNGERLEAHSGLGKMRDNPRYVDKKMRGPTPPHTYALTIR CCHHHCCEEEEEECCCEEECCCCCEEEHHCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEH ESLFHGVEALRLTPLQGSDAIYDRVGLLAHTYMLGKNGDSNGCVSFKDYKRFLAAYKRGD HHHHHCHHHEEEECCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHHCCC IRQLVVVPRLNNKPSSTLASLFSSRS CEEEEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure AFAVGTFDDVTPLGGSAFRLRRSRGFLYGVVGAGFLTSTWLITTLATMHSVAAPVSPPE EEEECCCCCCCCCCCHHHEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHH RFTQVALAPKPKPATHERLIHVGKADRLAAFDAKPVVALTADLVQAHAQKTSAAATALAA HHHEEEECCCCCCCHHHHHEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LTKHNRLVMAAEQPVVAAISESAKFRKDDVVTPPAVEVASAETVEEDDSDRIVVPSKEAV HHHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHH AAAELPALLALADAGPQQIAPAPVEPPAPALKTASLPQEKSAPVEIAAAEDQQPFDLVLA HHHHHHHHEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEC PDAGSVPLPMARPDGLIGKPAPAAKGSQRAGEPALAYAQPNSPIEDDQDDAVPRYDKPVF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC SPKLRAGVAIYDIENSTVYLPNGERLEAHSGLGKMRDNPRYVDKKMRGPTPPHTYALTIR CCHHHCCEEEEEECCCEEECCCCCEEEHHCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEH ESLFHGVEALRLTPLQGSDAIYDRVGLLAHTYMLGKNGDSNGCVSFKDYKRFLAAYKRGD HHHHHCHHHEEEECCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHHCCC IRQLVVVPRLNNKPSSTLASLFSSRS CEEEEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA