Definition Escherichia coli O157:H7 str. EC4115, complete genome.
Accession NC_011353
Length 5,572,075

Click here to switch to the map view.

The map label for this gene is yciW [H]

Identifier: 209400889

GI number: 209400889

Start: 1816694

End: 1817821

Strand: Reverse

Name: yciW [H]

Synonym: ECH74115_1924

Alternate gene names: 209400889

Gene position: 1817821-1816694 (Counterclockwise)

Preceding gene: 209400132

Following gene: 209396001

Centisome position: 32.62

GC content: 50.98

Gene sequence:

>1128_bases
ATGGAACAACGCCACATCACCGGCAAAAGCCACTGGTATCATGAAACGCAATCCAGTACTACGGAGTATGACGTTCTGCC
TCTGGTCCCGGAAGCCGCAAAGGTCAGCGATCCCTTTCTACTCGACGTGATCCTTGAAAAAGAAACGCTGGCCCCCTTCC
TTTCATGGCTGGACCCTGCGCGTGTTCTTGCAGTGGAGTTGTTCCCTGACCAGCTTACCGTGACCCGTTCACAGACCTTC
ACCGCTTATGAACGCTTGTCGACGGCCCTGACGGTTGCTCAGGTTTGCGGCGTCCAGCGGTTATGTAACTACTATTCGGC
GCGACTTACGCCGCTCCCCGGGCCTGATTCCACCAGGGAAAGTAATCATCGGTTGGCACAAATCACGCAATATGCCCGCC
AACTGGCTAGCTCGCCTTCTATTATCGACAACCGATCGCGCCAGCATCTGAATGACGTCGGTCTTACTGCCTGGGACTGT
GTGATCATTAACCAAATCATTGGTTTTATTGGCTTTCAGGCGCGGACAATTGCGACATTTCAGGCTTATCTCGGGCATCC
GGTACGCTGGTTACCCGGGCTGGAGATACAAAACTACGCCGACGCGTCACTGTTTGCTGATGAATCATTACGCTGGCGAA
GCAGCTATGAGGTGGAAAAACTACCTGAAGAACACACAAAAAGTTCAACTGCAGAACTTTGCCAACTGGCCGAAATACTC
TCTCTCCACCCTATTTCACTTTCCCTTCTCGAAAGGTTGTTAAACAGCACACGGGTTAATACACAGCCGGATAATCAGCT
TGCGGCGTTGTTATGCGCGCGGATAAATGGCAGTCCTGCTTGTTTTGCCGCCTGTATGGATTCATCAAATGAATATAAAA
AAATCAGCCCCCTTCTGCGCAAGGGCGAAAATGAAATTAACCAATGGGCTGACCGTCATTCTGTTGAGCGCGCTACCGTT
CAGGCGATACAATGGCTGACCCGAGCACCCGATCGCTTTAGCGCCGCCCAGTTCAGCCCTTTACTCGAACACGAAAAATC
ATCAACGCAGATTATTAATCTGCTGGTATGGAGCGGGCTGTGTGGCTGGATAAATCGCTTAAAAATCGCGTTGGGTGAGA
CATATTAA

Upstream 100 bases:

>100_bases
CTCTGTTATACCTTTCTGATATTTGTTATCGCCGATCCGTCTTTCTCCCCTTCCCGCCTTGCGTCAGGATAACGATTTCC
TTTACGACCAAGGAGCGCCC

Downstream 100 bases:

>100_bases
CCTTGCCGCGTCAGACAGATTCGCGTAAAACTGTCAGCCGCTCTAATGGCCACCAAAATAGACAATTATGTTTCAGGACA
ACCCGCTGCTAGCGCAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVELFPDQLTVTRSQTF
TAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC
VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL
SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVERATV
QAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY

Sequences:

>Translated_375_residues
MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVELFPDQLTVTRSQTF
TAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC
VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL
SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVERATV
QAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY
>Mature_375_residues
MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVELFPDQLTVTRSQTF
TAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC
VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL
SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVERATV
QAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY

Specific function: Unknown

COG id: COG4950

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081868, Length=375, Percent_Identity=98.1333333333333, Blast_Score=761, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42279; Mature: 42279

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPA
CCCCCCCCCCCCEECCCCCCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHH
RVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRE
HEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDCVIINQIIGFIGFQARTIATF
HHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
QAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL
HHHHCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHH
SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLR
HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
KGENEINQWADRHSVERATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
CGWINRLKIALGETY
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPA
CCCCCCCCCCCCEECCCCCCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHH
RVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRE
HEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDCVIINQIIGFIGFQARTIATF
HHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
QAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL
HHHHCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHH
SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLR
HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
KGENEINQWADRHSVERATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
CGWINRLKIALGETY
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]