| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yciW [H]
Identifier: 209400889
GI number: 209400889
Start: 1816694
End: 1817821
Strand: Reverse
Name: yciW [H]
Synonym: ECH74115_1924
Alternate gene names: 209400889
Gene position: 1817821-1816694 (Counterclockwise)
Preceding gene: 209400132
Following gene: 209396001
Centisome position: 32.62
GC content: 50.98
Gene sequence:
>1128_bases ATGGAACAACGCCACATCACCGGCAAAAGCCACTGGTATCATGAAACGCAATCCAGTACTACGGAGTATGACGTTCTGCC TCTGGTCCCGGAAGCCGCAAAGGTCAGCGATCCCTTTCTACTCGACGTGATCCTTGAAAAAGAAACGCTGGCCCCCTTCC TTTCATGGCTGGACCCTGCGCGTGTTCTTGCAGTGGAGTTGTTCCCTGACCAGCTTACCGTGACCCGTTCACAGACCTTC ACCGCTTATGAACGCTTGTCGACGGCCCTGACGGTTGCTCAGGTTTGCGGCGTCCAGCGGTTATGTAACTACTATTCGGC GCGACTTACGCCGCTCCCCGGGCCTGATTCCACCAGGGAAAGTAATCATCGGTTGGCACAAATCACGCAATATGCCCGCC AACTGGCTAGCTCGCCTTCTATTATCGACAACCGATCGCGCCAGCATCTGAATGACGTCGGTCTTACTGCCTGGGACTGT GTGATCATTAACCAAATCATTGGTTTTATTGGCTTTCAGGCGCGGACAATTGCGACATTTCAGGCTTATCTCGGGCATCC GGTACGCTGGTTACCCGGGCTGGAGATACAAAACTACGCCGACGCGTCACTGTTTGCTGATGAATCATTACGCTGGCGAA GCAGCTATGAGGTGGAAAAACTACCTGAAGAACACACAAAAAGTTCAACTGCAGAACTTTGCCAACTGGCCGAAATACTC TCTCTCCACCCTATTTCACTTTCCCTTCTCGAAAGGTTGTTAAACAGCACACGGGTTAATACACAGCCGGATAATCAGCT TGCGGCGTTGTTATGCGCGCGGATAAATGGCAGTCCTGCTTGTTTTGCCGCCTGTATGGATTCATCAAATGAATATAAAA AAATCAGCCCCCTTCTGCGCAAGGGCGAAAATGAAATTAACCAATGGGCTGACCGTCATTCTGTTGAGCGCGCTACCGTT CAGGCGATACAATGGCTGACCCGAGCACCCGATCGCTTTAGCGCCGCCCAGTTCAGCCCTTTACTCGAACACGAAAAATC ATCAACGCAGATTATTAATCTGCTGGTATGGAGCGGGCTGTGTGGCTGGATAAATCGCTTAAAAATCGCGTTGGGTGAGA CATATTAA
Upstream 100 bases:
>100_bases CTCTGTTATACCTTTCTGATATTTGTTATCGCCGATCCGTCTTTCTCCCCTTCCCGCCTTGCGTCAGGATAACGATTTCC TTTACGACCAAGGAGCGCCC
Downstream 100 bases:
>100_bases CCTTGCCGCGTCAGACAGATTCGCGTAAAACTGTCAGCCGCTCTAATGGCCACCAAAATAGACAATTATGTTTCAGGACA ACCCGCTGCTAGCGCAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVELFPDQLTVTRSQTF TAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVERATV QAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY
Sequences:
>Translated_375_residues MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVELFPDQLTVTRSQTF TAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVERATV QAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY >Mature_375_residues MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVELFPDQLTVTRSQTF TAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDC VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVERATV QAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY
Specific function: Unknown
COG id: COG4950
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081868, Length=375, Percent_Identity=98.1333333333333, Blast_Score=761, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42279; Mature: 42279
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPA CCCCCCCCCCCCEECCCCCCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHH RVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRE HEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDCVIINQIIGFIGFQARTIATF HHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH QAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL HHHHCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHH SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLR HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH KGENEINQWADRHSVERATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH CGWINRLKIALGETY HHHHHHHHHHHCCCC >Mature Secondary Structure MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPA CCCCCCCCCCCCEECCCCCCCCCCCEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHH RVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRE HEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDCVIINQIIGFIGFQARTIATF HHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH QAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEIL HHHHCCCEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHH SLHPISLSLLERLLNSTRVNTQPDNQLAALLCARINGSPACFAACMDSSNEYKKISPLLR HCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH KGENEINQWADRHSVERATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH CGWINRLKIALGETY HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]