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The map label for this gene is ygbE [H]

Identifier: 209400636

GI number: 209400636

Start: 3697934

End: 3698257

Strand: Reverse

Name: ygbE [H]

Synonym: ECH74115_4001

Alternate gene names: 209400636

Gene position: 3698257-3697934 (Counterclockwise)

Preceding gene: 209399413

Following gene: 209396991

Centisome position: 66.37

GC content: 47.53

Gene sequence:

>324_bases
ATGCGTAATAGCCATAACATTACACTAACAAATAACGACAGCCTTACTGAGGATGAAGAAACCACATGGTCACTGCCTGG
TGCCGTGGTCGGTTTTATCTCCTGGTTATTTGCGCTGGCGATGCCGATGTTGATTTATGGCTCTAACACGCTGTTCTTCT
TTATCTACACCTGGCCTTTCTTTCTGGCGCTGATGCCCGTTGCGGTAGTGGTGGGGATTGCGCTGCATTCATTGATGGAC
GGAAAGCTACGCTACAGTATTGTTTTCACCCTGATGACAGTAGGCATTATGTTTGGCGCACTGTTTATGTGGCTACTGGG
CTAA

Upstream 100 bases:

>100_bases
GTACAGCAATTATTAGATCTGTTGAGACAGAACGATATTATCAGATCCTGAGACACCACCGGGTTTCCATGCCCGGTTCG
TCAAAGTAACAGGATCAAAT

Downstream 100 bases:

>100_bases
TTTGTACTTTCTTGTCTCCTCTGTTCATAATTCAAACCGTAACTAATAATGAGATTATGTTCTGCACGCCCTGGGTATAC
GTAACAATGGACAAATGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMD
GKLRYSIVFTLMTVGIMFGALFMWLLG

Sequences:

>Translated_107_residues
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMD
GKLRYSIVFTLMTVGIMFGALFMWLLG
>Mature_107_residues
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMD
GKLRYSIVFTLMTVGIMFGALFMWLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789106, Length=107, Percent_Identity=99.0654205607477, Blast_Score=212, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022721 [H]

Pfam domain/function: PF12084 DUF3561 [H]

EC number: NA

Molecular weight: Translated: 12049; Mature: 12049

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPF
CCCCCCEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FLALMPVAVVVGIALHSLMDGKLRYSIVFTLMTVGIMFGALFMWLLG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPF
CCCCCCEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
FLALMPVAVVVGIALHSLMDGKLRYSIVFTLMTVGIMFGALFMWLLG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1316900; 7567469 [H]