| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is yeeP [H]
Identifier: 209400007
GI number: 209400007
Start: 1386492
End: 1387364
Strand: Direct
Name: yeeP [H]
Synonym: ECH74115_1393
Alternate gene names: 209400007
Gene position: 1386492-1387364 (Clockwise)
Preceding gene: 209396679
Following gene: 209399047
Centisome position: 24.88
GC content: 57.73
Gene sequence:
>873_bases ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCTCTCCTCCCTGCCTTACTCGCTTTCCCGTCACATCCTGGA ACATCTGCGCAAACTCACCAGTCACGAACCCGTGATTGGCATTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTA ATGCACTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCGGCGCTTCCGTCTGAGT GGCCATGGTCACAGCATGGTTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTATGAAGCCCT GTACCGTGACATTCTGCCTGAACTGGACTTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGT ATTTCTGGCGACACATACTGCACCGGGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGACAAAACAGAGCCCTGC CATGAATGGGATATGGCAGGTATTCAGCCTTCTCCCGCACAGGAACAGAACATTCGCGAAAAAACAGATGCGGTATTCCG GCTGTTCCGGCCCGTACATCCGGTTGTTGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA TGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGCCTGCAGGACGAGCTGTGCACGGAATCTGTCTGGGGG CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGTGGAGAGCGTCTGTGTTGCCTCTGTTGCACG CACAGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGCGCGGTATGGAACTGGATTTTCTTCTGA
Upstream 100 bases:
>100_bases ACCTGCATCCTAAATAATTTCAGACAGATATTATCGTTGTGAATCCCCCGCCACCTTTCCGGTGCGCGGGGTTTTGTCTT TTTTCACCGGGAATACATGT
Downstream 100 bases:
>100_bases ACAGTCTGCCAGGGGAAATGTCTGATTACATTGCGTTAACCAACTGAAAACATGATACAAACACCTCATGCCCCTCCTGT TTCTCTTGCGTGACTGCTCT
Product: putative GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC HEWDMAGIQPSPAQEQNIREKTDAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVWG QAREQFTGAVDRIFDTVESVCVASVARTVLRAVRDTVVSVARAVWNWIFF
Sequences:
>Translated_290_residues MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC HEWDMAGIQPSPAQEQNIREKTDAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVWG QAREQFTGAVDRIFDTVESVCVASVARTVLRAVRDTVVSVARAVWNWIFF >Mature_290_residues MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVRRFRLS GHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC HEWDMAGIQPSPAQEQNIREKTDAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVWG QAREQFTGAVDRIFDTVESVCVASVARTVLRAVRDTVVSVARAVWNWIFF
Specific function: Unknown
COG id: COG3596
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfjP and ykfA [H]
Homologues:
Organism=Escherichia coli, GI48994902, Length=291, Percent_Identity=49.4845360824742, Blast_Score=272, Evalue=2e-74, Organism=Escherichia coli, GI87081706, Length=291, Percent_Identity=48.7972508591065, Blast_Score=271, Evalue=3e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32498; Mature: 32498
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGE CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC VTPVSDVHAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLW CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQEQNIRE HHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH KTDAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVWG HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH QAREQFTGAVDRIFDTVESVCVASVARTVLRAVRDTVVSVARAVWNWIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGKSGAGKSSLCNALFQGE CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCC VTPVSDVHAGTREVRRFRLSGHGHSMVITDLPGVGESRDRDAEYEALYRDILPELDLVLW CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQEQNIRE HHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH KTDAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELCTESVWG HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH QAREQFTGAVDRIFDTVESVCVASVARTVLRAVRDTVVSVARAVWNWIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]