Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is yibI [H]
Identifier: 209399646
GI number: 209399646
Start: 4615433
End: 4615795
Strand: Reverse
Name: yibI [H]
Synonym: ECH74115_4968
Alternate gene names: 209399646
Gene position: 4615795-4615433 (Counterclockwise)
Preceding gene: 209399974
Following gene: 209399731
Centisome position: 82.84
GC content: 51.24
Gene sequence:
>363_bases ATGTTTCTAAACTATTTCGCGTTGGGAGTGCTGATCTTCGTCTTTCTGGTGATTTTTTATGGAATCATCGCGATACATGA CATCCCTTATCTGATTGCCAAAAAGCGCAATCACCCCCATGCCGACGCTATTCATACGGCGGGCTGGGTGAGCCTGTTTA CTCTGCATGTTATCTGGCCGTTTCTGTGGATCTGGGCGACGCTCTATCAACCGGAGCGTGGCTGGGGTATGCAGTCACAT GTTGCGTCGCAGGAGAAAGCGACTGACCCGGAAATCGCCTCACTTTCTGACCGAATTTCCCGGCTGGAGCATCAACTCGC CGCCGAGAAAAAGACTGACTATTCCACGTTCCCGGAGATCTAA
Upstream 100 bases:
>100_bases GCGAGAATCGCGAACCCGGATTATTGTCAAAATATCAGCCTGACTCCCTTCTGGCTGCCAGCCCAAAAACAACACTGATA AACGTGAATCCGAGGCAGAT
Downstream 100 bases:
>100_bases TTATGGATCTATTGATTGTTTTAACTTACGTGGCGCTGGCGTGGGCGGTCTTTAAAATCTTCCGCATTCCGGTAAATCAG TGGACGCTGGCGACGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSH VASQEKATDPEIASLSDRISRLEHQLAAEKKTDYSTFPEI
Sequences:
>Translated_120_residues MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSH VASQEKATDPEIASLSDRISRLEHQLAAEKKTDYSTFPEI >Mature_120_residues MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSH VASQEKATDPEIASLSDRISRLEHQLAAEKKTDYSTFPEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yiaW [H]
Homologues:
Organism=Escherichia coli, GI1790025, Length=120, Percent_Identity=99.1666666666667, Blast_Score=246, Evalue=3e-67, Organism=Escherichia coli, GI1790013, Length=113, Percent_Identity=75.2212389380531, Blast_Score=172, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011223 [H]
Pfam domain/function: PF11742 DUF3302 [H]
EC number: NA
Molecular weight: Translated: 13882; Mature: 13882
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRLEHQLAAEKKTDYSTFPEI HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRLEHQLAAEKKTDYSTFPEI HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8387990; 8041620; 9278503 [H]